| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863141
Identifier: 33863141
GI number: 33863141
Start: 952919
End: 953485
Strand: Direct
Name: 33863141
Synonym: PMT0869
Alternate gene names: NA
Gene position: 952919-953485 (Clockwise)
Preceding gene: 33863140
Following gene: 33863142
Centisome position: 39.53
GC content: 48.85
Gene sequence:
>567_bases ATGGCTCGCCATGCTGTCATGACACGCCAAGTATGCACTCTGGTTCCCTATGAACCAAGGCAGAAACCAAGCTTACTAGT TAGTGCTGAGTTTGTATGGCATGAAGAAGGGATTCTTGAGCTCAGTTATGGGCTTCGAAGTCGAGGAGAAGCTGGGCTCA ACGATATTCAAATACCAGCCACTGCAATTTCACCACAGCGATGTGATGAGCTTTGGTCAAACACGTGCTTCGAGGCATTC CTAGCACATCCTGGGCAAGAGAACTACTGGGAACTCAATGTTGCCCCTAGTGGTAATTGGAATCTTTACTCCCTTGAGAA CTACCGCAACGGACTCAAACCAGAGCTCGGCGTACTCCTCCCAAACATCAGCATCCATGCTGGACCAAAAGATTTTCGCT GTGATGTACTTCTCAATTTACAGCCCTGGTTGCCAGGTATTTCCTGCCCAGAGTTCTCTCTCGCTGCGGTCATGAAACAT GCCGATGCAAGTTATAGCTATTGGGCCATTCGCCATACAGGCCAAGGTCCAGACTTTCATGACCGCCGAAGTTTCATTCA ACCCTAA
Upstream 100 bases:
>100_bases TTGATCGCGCGGAGGTGCAGTTCCGCCTCATGGAAAGTATTGAAGCTCATTGGACCTCTATTGTTGGCATGGTAGAGCGC CTGAGGAGCCAAAGCTAAAG
Downstream 100 bases:
>100_bases ATCGTTCACTCCTCCTGGGGACAATGCAGCAGCTCAAAAGCAAAAGCATTCCAATGCTCTAGATCAATCAGACTTATCAT TCTCAGAACTTCATTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MARHAVMTRQVCTLVPYEPRQKPSLLVSAEFVWHEEGILELSYGLRSRGEAGLNDIQIPATAISPQRCDELWSNTCFEAF LAHPGQENYWELNVAPSGNWNLYSLENYRNGLKPELGVLLPNISIHAGPKDFRCDVLLNLQPWLPGISCPEFSLAAVMKH ADASYSYWAIRHTGQGPDFHDRRSFIQP
Sequences:
>Translated_188_residues MARHAVMTRQVCTLVPYEPRQKPSLLVSAEFVWHEEGILELSYGLRSRGEAGLNDIQIPATAISPQRCDELWSNTCFEAF LAHPGQENYWELNVAPSGNWNLYSLENYRNGLKPELGVLLPNISIHAGPKDFRCDVLLNLQPWLPGISCPEFSLAAVMKH ADASYSYWAIRHTGQGPDFHDRRSFIQP >Mature_187_residues ARHAVMTRQVCTLVPYEPRQKPSLLVSAEFVWHEEGILELSYGLRSRGEAGLNDIQIPATAISPQRCDELWSNTCFEAFL AHPGQENYWELNVAPSGNWNLYSLENYRNGLKPELGVLLPNISIHAGPKDFRCDVLLNLQPWLPGISCPEFSLAAVMKHA DASYSYWAIRHTGQGPDFHDRRSFIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21277; Mature: 21146
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARHAVMTRQVCTLVPYEPRQKPSLLVSAEFVWHEEGILELSYGLRSRGEAGLNDIQIPA CCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEECCC TAISPQRCDELWSNTCFEAFLAHPGQENYWELNVAPSGNWNLYSLENYRNGLKPELGVLL CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCCCEEEE PNISIHAGPKDFRCDVLLNLQPWLPGISCPEFSLAAVMKHADASYSYWAIRHTGQGPDFH CCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHH DRRSFIQP HHHHCCCC >Mature Secondary Structure ARHAVMTRQVCTLVPYEPRQKPSLLVSAEFVWHEEGILELSYGLRSRGEAGLNDIQIPA CCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEECCC TAISPQRCDELWSNTCFEAFLAHPGQENYWELNVAPSGNWNLYSLENYRNGLKPELGVLL CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCCCEEEE PNISIHAGPKDFRCDVLLNLQPWLPGISCPEFSLAAVMKHADASYSYWAIRHTGQGPDFH CCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHH DRRSFIQP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA