| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863102
Identifier: 33863102
GI number: 33863102
Start: 906943
End: 907737
Strand: Reverse
Name: 33863102
Synonym: PMT0830
Alternate gene names: NA
Gene position: 907737-906943 (Counterclockwise)
Preceding gene: 33863103
Following gene: 33863100
Centisome position: 37.65
GC content: 52.58
Gene sequence:
>795_bases ATGAGGGCAAAGGTGAGAGCAAAACGCTTACTACCGTCTGGCTGCAGTTTCCATATCACGCTGCGCTGCAATAGCCGGCA GTTCTTAATTGCCAAAGCCCTTAGGCGTGATGTGTTGTTGGCAGTGCTCAATAAAGCCCAGCAGAAGTTTCCTGTGAGGG TGTATGGGCTGTGCTTGATGGCTAACCACCTTCACTTGCTCGTTAAGCCAACCGATGCCAAGGATTTGCCGAGGTTGATG CATTGGTTCGCCTGGTATTCCGCCATGGCCTTGAACCGCTTGAGCGGCCGTTGTGGGCACTTCTGGGAGGCCAGGTATTT CTCAACGCCGATCCACCCCAAAGACCACAGAAGGGAGTTGAACACCTTGAGGTATATCCATGCCAATCCCAAAGCGGCTG GGGTAAGGAAAGGCTTTTATGACCCCTATTCCAACTATGGCCACTACGTCAGGTTGCAATCAGACGGCATCAGCGAGTGG CACCCCAGCTTCCTGCAACTGGCATCAAGCCTGAAGGGCTGTTCCAGGCGTTATGAGCGCTTTTGCGAGCGGTATCGCCA TCAGGCCAAAGCAGGAGCCAAATGCCATTGGGGTTCACGGATGCTGAAGCGATTTGTTCAGAGCAGCAGGAGCAACAGAA GCAAGAGAAAGCGAATATCTCCAGGTCAACAGCAACTCCCTTTTGCTTTTGATATTCGGCTCAATCAAATCCCAGAGGAG TGGCATCAGGTTGCGGTGAGATTTCGCAAGACGAATGGCATCCGTGATGGTGATTCACGTCTGTTGCTGTGGTGA
Upstream 100 bases:
>100_bases TCGATCCGCAGAGCTTTGGTTGAGCTGGCTGTGCTCTCAGACGACGAGTGATTTAGCGATCAGTGGAATAACAGCTCTGA GGCTGTAGATGTTTGAGTAA
Downstream 100 bases:
>100_bases TTAAGTTAGGAATATAAGTAGTTTTAGGGCAAAAGGATTTAGAGGTAAATTTGTGATGAATACGAAAAACTATTGGTGGT TGTTGCCTGCTAAATAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRAKVRAKRLLPSGCSFHITLRCNSRQFLIAKALRRDVLLAVLNKAQQKFPVRVYGLCLMANHLHLLVKPTDAKDLPRLM HWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRELNTLRYIHANPKAAGVRKGFYDPYSNYGHYVRLQSDGISEW HPSFLQLASSLKGCSRRYERFCERYRHQAKAGAKCHWGSRMLKRFVQSSRSNRSKRKRISPGQQQLPFAFDIRLNQIPEE WHQVAVRFRKTNGIRDGDSRLLLW
Sequences:
>Translated_264_residues MRAKVRAKRLLPSGCSFHITLRCNSRQFLIAKALRRDVLLAVLNKAQQKFPVRVYGLCLMANHLHLLVKPTDAKDLPRLM HWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRELNTLRYIHANPKAAGVRKGFYDPYSNYGHYVRLQSDGISEW HPSFLQLASSLKGCSRRYERFCERYRHQAKAGAKCHWGSRMLKRFVQSSRSNRSKRKRISPGQQQLPFAFDIRLNQIPEE WHQVAVRFRKTNGIRDGDSRLLLW >Mature_264_residues MRAKVRAKRLLPSGCSFHITLRCNSRQFLIAKALRRDVLLAVLNKAQQKFPVRVYGLCLMANHLHLLVKPTDAKDLPRLM HWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRELNTLRYIHANPKAAGVRKGFYDPYSNYGHYVRLQSDGISEW HPSFLQLASSLKGCSRRYERFCERYRHQAKAGAKCHWGSRMLKRFVQSSRSNRSKRKRISPGQQQLPFAFDIRLNQIPEE WHQVAVRFRKTNGIRDGDSRLLLW
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31073; Mature: 31073
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAKVRAKRLLPSGCSFHITLRCNSRQFLIAKALRRDVLLAVLNKAQQKFPVRVYGLCLM CCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ANHLHLLVKPTDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRREL HCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHH NTLRYIHANPKAAGVRKGFYDPYSNYGHYVRLQSDGISEWHPSFLQLASSLKGCSRRYER HHHHEEECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH FCERYRHQAKAGAKCHWGSRMLKRFVQSSRSNRSKRKRISPGQQQLPFAFDIRLNQIPEE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCEEEEEEHHCCHHH WHQVAVRFRKTNGIRDGDSRLLLW HHHHHHHHHHCCCCCCCCCCEECC >Mature Secondary Structure MRAKVRAKRLLPSGCSFHITLRCNSRQFLIAKALRRDVLLAVLNKAQQKFPVRVYGLCLM CCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ANHLHLLVKPTDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRREL HCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHH NTLRYIHANPKAAGVRKGFYDPYSNYGHYVRLQSDGISEWHPSFLQLASSLKGCSRRYER HHHHEEECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH FCERYRHQAKAGAKCHWGSRMLKRFVQSSRSNRSKRKRISPGQQQLPFAFDIRLNQIPEE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCEEEEEEHHCCHHH WHQVAVRFRKTNGIRDGDSRLLLW HHHHHHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA