| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863097
Identifier: 33863097
GI number: 33863097
Start: 903452
End: 904429
Strand: Direct
Name: 33863097
Synonym: PMT0825
Alternate gene names: NA
Gene position: 903452-904429 (Clockwise)
Preceding gene: 33863096
Following gene: 33863099
Centisome position: 37.47
GC content: 55.42
Gene sequence:
>978_bases ATGAATCTTCCAACCTGGTTCGGAAGCTCCCAGCGTTCGAGCACAACGCCTCTTGAAGTAAGCCTTAAGCGTGGCTCCAG CGTGGAGTCGATCCATCGCGTGCATGCTGTGGTTTGCGATGGGCGAGGGCGCGTCCTGATGCGAGCGGGTTGTGCAGACT TTGAAACCTTCATCCGTTCAGCTCTAAAGCCCTTTCAAGCACTGCCATTTTTGAGTAGTGGTGCAGCGGAGCAAATGAAC TGTGGAGAAAAAGGATTAGCAATCTGCTGTGGATCCCATTCAGGGACACCCGCCCATGCCCGCGAAGCCTTCAGGTTGCT TTGGAATGCCGAGCTAGACCCAAGCCTGCTGCAATGCCCCATTCCAAGGGGAGGCACGAGCCCGCTAGAGCACAACTGCT CCGGGAAACATGCTGGCTTTCTTGCGACGAGCAAGAAAATGGGTTGGCCCCTTGATTCATACCTGCAAGGCAACCATCCT CTGCAAGTCGAAGTGAATCGACGCATAGCCGAACTGCTTGGGCTACCGGCCGACGAGCTCGTAGCTGCCAGGGATGACTG TGGAGCACCAACCCTTCGCCTACGGCTAGACCAAATCGCTCTGCTCTATGCCCATCTCGGGGCATCACGTCAGGCAGAAA TGGAACAAGTGATCAGGGCGATGTTGGCCCATCCTGAACTCGTAGCAGGGGAAGGCCGATTTGACACTGAGCTCATGCGA CGAGCTCACGGACAAATCGTGAGCAAGGGTGGAGCAGAAGGTGTCCAATGTCTAAGCCGCGTTGGTGAAGGGATGGGTGT AGCGATCAAAGTAGAAGACGGATCCAAACGAGCAAAACACGCTGTAGCGCTCCACCTACTTCGCCAACTTGATTGGCTCA CCCCAACCGGACTGCAAGAATTAGAGGAACAGGTGTTGCTCATTGCTCCAGGTGTGCAGCTGGAAGTGGCCGGCGCTCTT CGATACCAGGAAACCTAA
Upstream 100 bases:
>100_bases CTTGGTTATTTGGCACGAACCATGGACTTCATCACAAGCTTCATCATCCAAGGGGGCGAGTCTCTGCCAGGCTCTCTGAA GCCCAAAAGTCTGCTTGAGC
Downstream 100 bases:
>100_bases ACAAAGACCAGGTTGCACAAGCCTCAAAAGGTATGCTTTGAGGGTCACCGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGG CTCATAACCCGAAGGTCGGG
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNLPTWFGSSQRSSTTPLEVSLKRGSSVESIHRVHAVVCDGRGRVLMRAGCADFETFIRSALKPFQALPFLSSGAAEQMN CGEKGLAICCGSHSGTPAHAREAFRLLWNAELDPSLLQCPIPRGGTSPLEHNCSGKHAGFLATSKKMGWPLDSYLQGNHP LQVEVNRRIAELLGLPADELVAARDDCGAPTLRLRLDQIALLYAHLGASRQAEMEQVIRAMLAHPELVAGEGRFDTELMR RAHGQIVSKGGAEGVQCLSRVGEGMGVAIKVEDGSKRAKHAVALHLLRQLDWLTPTGLQELEEQVLLIAPGVQLEVAGAL RYQET
Sequences:
>Translated_325_residues MNLPTWFGSSQRSSTTPLEVSLKRGSSVESIHRVHAVVCDGRGRVLMRAGCADFETFIRSALKPFQALPFLSSGAAEQMN CGEKGLAICCGSHSGTPAHAREAFRLLWNAELDPSLLQCPIPRGGTSPLEHNCSGKHAGFLATSKKMGWPLDSYLQGNHP LQVEVNRRIAELLGLPADELVAARDDCGAPTLRLRLDQIALLYAHLGASRQAEMEQVIRAMLAHPELVAGEGRFDTELMR RAHGQIVSKGGAEGVQCLSRVGEGMGVAIKVEDGSKRAKHAVALHLLRQLDWLTPTGLQELEEQVLLIAPGVQLEVAGAL RYQET >Mature_325_residues MNLPTWFGSSQRSSTTPLEVSLKRGSSVESIHRVHAVVCDGRGRVLMRAGCADFETFIRSALKPFQALPFLSSGAAEQMN CGEKGLAICCGSHSGTPAHAREAFRLLWNAELDPSLLQCPIPRGGTSPLEHNCSGKHAGFLATSKKMGWPLDSYLQGNHP LQVEVNRRIAELLGLPADELVAARDDCGAPTLRLRLDQIALLYAHLGASRQAEMEQVIRAMLAHPELVAGEGRFDTELMR RAHGQIVSKGGAEGVQCLSRVGEGMGVAIKVEDGSKRAKHAVALHLLRQLDWLTPTGLQELEEQVLLIAPGVQLEVAGAL RYQET
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35160; Mature: 35160
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPTWFGSSQRSSTTPLEVSLKRGSSVESIHRVHAVVCDGRGRVLMRAGCADFETFIRS CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHH ALKPFQALPFLSSGAAEQMNCGEKGLAICCGSHSGTPAHAREAFRLLWNAELDPSLLQCP HHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCC IPRGGTSPLEHNCSGKHAGFLATSKKMGWPLDSYLQGNHPLQVEVNRRIAELLGLPADEL CCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCHHHH VAARDDCGAPTLRLRLDQIALLYAHLGASRQAEMEQVIRAMLAHPELVAGEGRFDTELMR HHCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHH RAHGQIVSKGGAEGVQCLSRVGEGMGVAIKVEDGSKRAKHAVALHLLRQLDWLTPTGLQE HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHH LEEQVLLIAPGVQLEVAGALRYQET HHCCEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure MNLPTWFGSSQRSSTTPLEVSLKRGSSVESIHRVHAVVCDGRGRVLMRAGCADFETFIRS CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHH ALKPFQALPFLSSGAAEQMNCGEKGLAICCGSHSGTPAHAREAFRLLWNAELDPSLLQCP HHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCC IPRGGTSPLEHNCSGKHAGFLATSKKMGWPLDSYLQGNHPLQVEVNRRIAELLGLPADEL CCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCHHHH VAARDDCGAPTLRLRLDQIALLYAHLGASRQAEMEQVIRAMLAHPELVAGEGRFDTELMR HHCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHH RAHGQIVSKGGAEGVQCLSRVGEGMGVAIKVEDGSKRAKHAVALHLLRQLDWLTPTGLQE HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHH LEEQVLLIAPGVQLEVAGALRYQET HHCCEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA