| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863095
Identifier: 33863095
GI number: 33863095
Start: 902298
End: 902933
Strand: Direct
Name: 33863095
Synonym: PMT0823
Alternate gene names: NA
Gene position: 902298-902933 (Clockwise)
Preceding gene: 33863092
Following gene: 33863096
Centisome position: 37.43
GC content: 52.2
Gene sequence:
>636_bases ATGAGCGAACTCCAGCGCCTTAAGGGGCAGCTGCCGCCAGAGATGCAGAGCTGGGTGTTCGTGGAGGCGGCAGCAGCGGT AGATCCACCGCTCATCACCCTCGAGGAAATCGGACGCGATGAGGTCGAGATCCAAATCGATCTCGAACAATGGGACAATT TCGCGCTCGACCATCGCAACTTGCTTTTTTGGCATGAAGTTGGTCGAGTCCAGAACGACACCATTCCTCGCGATGGCTGG GAAATGGCTGCTCTAGCCATCGGCCTCGGCGGTGCAATTGGTGAACTCTGGGTTCAAGACGGATTGTTGCTATTAATGGC CCTAGGTCTTTCGGGCTTCGCTGGATATCGGCTCTATTTAAAAAACAACTCTGAAAAGCGGCTTCAGGATGCAATCGCTG CCGATGAACGGGCTATTGATCTGGCCTGTCGTTTTAATTACAGCGTGCCGAATGCCTACAAGAGCCTTGGGGGAGCGCTA AAGGAGCTTGTGGAACAAACCCGCAAAAAGAAGAAGCGAAGCTTCTATGAAGATCGATTGGAAGCCCTTAGAAAAAGTGC TGAAAAAGCTCGAGCAGAGATGGCTGAACAGGAAGGATCTCGCCAATCCGTAAGCAGTGAGAACGTCTATGGATAG
Upstream 100 bases:
>100_bases AACGCGACTAGCTTCCCACGCAACGTCAGAGATAGCTCAGGGAAAACACCCAGGCGCCATGTAGTCGCTAGCTTGATGAG TACGGAGAGAGATCAAGACC
Downstream 100 bases:
>100_bases TGAACAGCTAGCAGAAATGGCCGCTGAAGCCTGCGACGATCGCAAAGCTACAGACATTCAACTGATCCGAATCGATGAGG TCTCCAGCCTGGCGGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSELQRLKGQLPPEMQSWVFVEAAAAVDPPLITLEEIGRDEVEIQIDLEQWDNFALDHRNLLFWHEVGRVQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAIAADERAIDLACRFNYSVPNAYKSLGGAL KELVEQTRKKKKRSFYEDRLEALRKSAEKARAEMAEQEGSRQSVSSENVYG
Sequences:
>Translated_211_residues MSELQRLKGQLPPEMQSWVFVEAAAAVDPPLITLEEIGRDEVEIQIDLEQWDNFALDHRNLLFWHEVGRVQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAIAADERAIDLACRFNYSVPNAYKSLGGAL KELVEQTRKKKKRSFYEDRLEALRKSAEKARAEMAEQEGSRQSVSSENVYG >Mature_210_residues SELQRLKGQLPPEMQSWVFVEAAAAVDPPLITLEEIGRDEVEIQIDLEQWDNFALDHRNLLFWHEVGRVQNDTIPRDGWE MAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAIAADERAIDLACRFNYSVPNAYKSLGGALK ELVEQTRKKKKRSFYEDRLEALRKSAEKARAEMAEQEGSRQSVSSENVYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021751 [H]
Pfam domain/function: PF11780 DUF3318 [H]
EC number: NA
Molecular weight: Translated: 23784; Mature: 23653
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELQRLKGQLPPEMQSWVFVEAAAAVDPPLITLEEIGRDEVEIQIDLEQWDNFALDHRN CCHHHHHHCCCCCHHHHHHHEEHHHHCCCCEEEHHHCCCCEEEEEEEHHHCCCCCCCCCC LLFWHEVGRVQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYL CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNNSEKRLQDAIAADERAIDLACRFNYSVPNAYKSLGGALKELVEQTRKKKKRSFYEDRL ECCCHHHHHHHHHHCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRKSAEKARAEMAEQEGSRQSVSSENVYG HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC >Mature Secondary Structure SELQRLKGQLPPEMQSWVFVEAAAAVDPPLITLEEIGRDEVEIQIDLEQWDNFALDHRN CHHHHHHCCCCCHHHHHHHEEHHHHCCCCEEEHHHCCCCEEEEEEEHHHCCCCCCCCCC LLFWHEVGRVQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYL CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNNSEKRLQDAIAADERAIDLACRFNYSVPNAYKSLGGALKELVEQTRKKKKRSFYEDRL ECCCHHHHHHHHHHCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRKSAEKARAEMAEQEGSRQSVSSENVYG HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]