| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is nadA [H]
Identifier: 33862934
GI number: 33862934
Start: 717593
End: 718594
Strand: Reverse
Name: nadA [H]
Synonym: PMT0661
Alternate gene names: 33862934
Gene position: 718594-717593 (Counterclockwise)
Preceding gene: 33862937
Following gene: 33862931
Centisome position: 29.81
GC content: 44.61
Gene sequence:
>1002_bases ATGGTCCGAATGACCGCTGTTTGCACCGCCAAGACGGTCTCTCCAGTGCCATCAACTAGGAAAGAATTAAAGGGTGCCAT TGCTGAACTACGCAAAAAACTCAATGCCGTGATCCTGGCTCACTACTACCAGGATCCAGAGATCCAAGACATCGCAGATT TCATTGGGGACTCCCTGGAACTATCACGTAGAGCTGCTAGCACAAATGCTGATGTAATCGTGTTCTGCGGGGTTCACTTC ATGGCTGAAACAGCAAAGATTCTCAGCCCGGAAAAAATTGTATTGCTACCAGATCTCGAAGCGGGGTGCTCCCTTGCTGA TGACTGCCCAGCCGATGAGTTTGCTGCTTTCAGAGACAAGCACCCAGACCACATTGTGGTGAGCTATATCAACTGCACAG CTGCTGTTAAGGCCCAAAGCGATCTGATCTGTACAAGTAGCAACGCTGTAGAACTTGTAAATCAATTACCGAAGGATCAA CCAATCCTTTTTGCTCCAGATCAAAACTTGGGCAGATGGGTTCAAAAGCAGAGCGGCAGAAAACTGACGATCTGGCCTGG ACGCTGCATGGTGCATGAAACATTCAGCGAAGAAGCTCTACTGAAATTAAAAATCATGCACCCCGAGGCAAAGGTAATAG CCCATCCGGAGTGCCTAGAAAATTTACTAGAGTTGGCGGATTATATTGGCTCAACGAGCAAATTACTTGAATTTACCGAG ATAAGTTCATGCACAAAATTTATCGTACTAACAGAGCCAGGAATCCTACACCAGATGAAATTGAAGAACCCAAAAAAAGA ATTTATGGATGTTCCAGGTATTGACGGATGTAGTTGCAATGAATGCCCATATATGCGATTGAATACATTAGAAAAGCTAT GGAGCTGCTTAAGCACAATGAAGCCATCAATAGAAATCGAAGAGGGGGTACGTCAAAAGGCTTTTATTCCTATTCAACGA ATGCTAAACATGAAAGAAACACAGGAGGCTAGTGAACATTAA
Upstream 100 bases:
>100_bases GTTCTGATCATCAGGTGTCCATACACCATGGAGGTCTCCAACAATGGCGAGGCTCTGGTGTGACGTGGCAAATGTCTAGG CTATGGCCATACTGCCCTAG
Downstream 100 bases:
>100_bases TTGTTCACTGTAAAGCTGAAGGTCAACACAACAAGAGAGAACTCTGAGAAATAATTCTTATTAGTTTAAAGATGGCGTGG AGAAAACTAGCCAATACTAC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVRMTAVCTAKTVSPVPSTRKELKGAIAELRKKLNAVILAHYYQDPEIQDIADFIGDSLELSRRAASTNADVIVFCGVHF MAETAKILSPEKIVLLPDLEAGCSLADDCPADEFAAFRDKHPDHIVVSYINCTAAVKAQSDLICTSSNAVELVNQLPKDQ PILFAPDQNLGRWVQKQSGRKLTIWPGRCMVHETFSEEALLKLKIMHPEAKVIAHPECLENLLELADYIGSTSKLLEFTE ISSCTKFIVLTEPGILHQMKLKNPKKEFMDVPGIDGCSCNECPYMRLNTLEKLWSCLSTMKPSIEIEEGVRQKAFIPIQR MLNMKETQEASEH
Sequences:
>Translated_333_residues MVRMTAVCTAKTVSPVPSTRKELKGAIAELRKKLNAVILAHYYQDPEIQDIADFIGDSLELSRRAASTNADVIVFCGVHF MAETAKILSPEKIVLLPDLEAGCSLADDCPADEFAAFRDKHPDHIVVSYINCTAAVKAQSDLICTSSNAVELVNQLPKDQ PILFAPDQNLGRWVQKQSGRKLTIWPGRCMVHETFSEEALLKLKIMHPEAKVIAHPECLENLLELADYIGSTSKLLEFTE ISSCTKFIVLTEPGILHQMKLKNPKKEFMDVPGIDGCSCNECPYMRLNTLEKLWSCLSTMKPSIEIEEGVRQKAFIPIQR MLNMKETQEASEH >Mature_333_residues MVRMTAVCTAKTVSPVPSTRKELKGAIAELRKKLNAVILAHYYQDPEIQDIADFIGDSLELSRRAASTNADVIVFCGVHF MAETAKILSPEKIVLLPDLEAGCSLADDCPADEFAAFRDKHPDHIVVSYINCTAAVKAQSDLICTSSNAVELVNQLPKDQ PILFAPDQNLGRWVQKQSGRKLTIWPGRCMVHETFSEEALLKLKIMHPEAKVIAHPECLENLLELADYIGSTSKLLEFTE ISSCTKFIVLTEPGILHQMKLKNPKKEFMDVPGIDGCSCNECPYMRLNTLEKLWSCLSTMKPSIEIEEGVRQKAFIPIQR MLNMKETQEASEH
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=312, Percent_Identity=42.6282051282051, Blast_Score=259, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 37174; Mature: 37174
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRMTAVCTAKTVSPVPSTRKELKGAIAELRKKLNAVILAHYYQDPEIQDIADFIGDSLE CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCHHH LSRRAASTNADVIVFCGVHFMAETAKILSPEKIVLLPDLEAGCSLADDCPADEFAAFRDK HHHHHCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCC HPDHIVVSYINCTAAVKAQSDLICTSSNAVELVNQLPKDQPILFAPDQNLGRWVQKQSGR CCCEEEEEEEEHEEEEECCCCEEEECCHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCC KLTIWPGRCMVHETFSEEALLKLKIMHPEAKVIAHPECLENLLELADYIGSTSKLLEFTE EEEEECCCEEEECCCCCCCEEEEEEECCCHHEEECHHHHHHHHHHHHHHCCHHHHHHHHH ISSCTKFIVLTEPGILHQMKLKNPKKEFMDVPGIDGCSCNECPYMRLNTLEKLWSCLSTM HHCCEEEEEECCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC KPSIEIEEGVRQKAFIPIQRMLNMKETQEASEH CCCCCHHHCCHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MVRMTAVCTAKTVSPVPSTRKELKGAIAELRKKLNAVILAHYYQDPEIQDIADFIGDSLE CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCHHH LSRRAASTNADVIVFCGVHFMAETAKILSPEKIVLLPDLEAGCSLADDCPADEFAAFRDK HHHHHCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCC HPDHIVVSYINCTAAVKAQSDLICTSSNAVELVNQLPKDQPILFAPDQNLGRWVQKQSGR CCCEEEEEEEEHEEEEECCCCEEEECCHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCC KLTIWPGRCMVHETFSEEALLKLKIMHPEAKVIAHPECLENLLELADYIGSTSKLLEFTE EEEEECCCEEEECCCCCCCEEEEEEECCCHHEEECHHHHHHHHHHHHHHCCHHHHHHHHH ISSCTKFIVLTEPGILHQMKLKNPKKEFMDVPGIDGCSCNECPYMRLNTLEKLWSCLSTM HHCCEEEEEECCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC KPSIEIEEGVRQKAFIPIQRMLNMKETQEASEH CCCCCHHHCCHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA