| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862929
Identifier: 33862929
GI number: 33862929
Start: 712206
End: 713183
Strand: Reverse
Name: 33862929
Synonym: PMT0656
Alternate gene names: NA
Gene position: 713183-712206 (Counterclockwise)
Preceding gene: 33862931
Following gene: 33862927
Centisome position: 29.58
GC content: 39.98
Gene sequence:
>978_bases ATGAGTTCAGTTTCAAATATATCAATTGAAGAGTACTGTAGACCCTTTATGCAATCTACTAAAAAATGGCCAAGCCTTCC TCTACCAGTGCATCCAGGCATTGAATGGTGGCAAAAATGGCTACAAGAGACAGCTTGCGAAGGATATTTCGAGAGTTTGC GTTCCTATCTACCACAGCTATGGATTAATCCTCATGATGGAGCGAATAAATCCGAGAGATACAAACAATTAGTACTACGA GGTAAAGCAATGAATAATGTAGAAAATGATAACATTCTGAAGCTTAAGGATCAACAAGGGTTTTCAGTTCGATTAGTCGA TCACCCATGCGGAACATACCCTGTAATAGAGATAAATGATCAGGATGATTTTTTGAATGTGGTACGTTGCTTAGCATACC GCTGTGAACAAACACATATCCAATCTTCTGTTCATGCCCAAGCTGTTGCTGGTTTAATTCACTGGGGGTTAATCCAAAAT ATAAATATTAAGGAACGTTGTCAGTTGATTATCCTACATCGCTCTCCATATAGCTCACTACCTATAAGTGTTATCCCAGG GAAACCGACAACAAAAGCATGGCTTGAAATCTCTCAAAGTTGGCGACTAGAACATGAACTAACCCATCTCGCCACAGAAC GATTAGCCGGAGAAATGAGGTTAAACCTATTTGATGAACTGGTTGCAGATGCCCTAGGTATGCTTAGGGCGCTAAATGTG TTTTCTGCCGACTTGTTTAGACAAGGGCTAGGGCTAAATAATGATGCTTCAACAACCACAACTGGACGAGTTCATACATA TCTAAAAGGATTGAATAAGAATGCCAGTAGATTAGCTTGTCAATATGTACTGCAACGTGCAAATGAGTTAGAGCAATTAT TAGAAGCAGGAATAATACCAGATGAGCGAATGGCTCTACTAAACTATCTGATGAATCAGAAGCTTGATCAACCATTTACG GCCAACAAGAGCTCGTAG
Upstream 100 bases:
>100_bases AGGCTATTTGTTAGGTTGGCTAGGCATCTGAATACTTATCAGAGATTAACGCTTGAAATCAACTATAATAATAATTTGAA TATTCAATTTCCCTAGAAAA
Downstream 100 bases:
>100_bases ACACAAGCCGAGTTTGGAACAGATTTATAAATTATCTTTGATACAAAAGAAGACTCTATTGAAATAGATTGCTTACAACA ACATGTGTCACTGACATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSSVSNISIEEYCRPFMQSTKKWPSLPLPVHPGIEWWQKWLQETACEGYFESLRSYLPQLWINPHDGANKSERYKQLVLR GKAMNNVENDNILKLKDQQGFSVRLVDHPCGTYPVIEINDQDDFLNVVRCLAYRCEQTHIQSSVHAQAVAGLIHWGLIQN INIKERCQLIILHRSPYSSLPISVIPGKPTTKAWLEISQSWRLEHELTHLATERLAGEMRLNLFDELVADALGMLRALNV FSADLFRQGLGLNNDASTTTTGRVHTYLKGLNKNASRLACQYVLQRANELEQLLEAGIIPDERMALLNYLMNQKLDQPFT ANKSS
Sequences:
>Translated_325_residues MSSVSNISIEEYCRPFMQSTKKWPSLPLPVHPGIEWWQKWLQETACEGYFESLRSYLPQLWINPHDGANKSERYKQLVLR GKAMNNVENDNILKLKDQQGFSVRLVDHPCGTYPVIEINDQDDFLNVVRCLAYRCEQTHIQSSVHAQAVAGLIHWGLIQN INIKERCQLIILHRSPYSSLPISVIPGKPTTKAWLEISQSWRLEHELTHLATERLAGEMRLNLFDELVADALGMLRALNV FSADLFRQGLGLNNDASTTTTGRVHTYLKGLNKNASRLACQYVLQRANELEQLLEAGIIPDERMALLNYLMNQKLDQPFT ANKSS >Mature_324_residues SSVSNISIEEYCRPFMQSTKKWPSLPLPVHPGIEWWQKWLQETACEGYFESLRSYLPQLWINPHDGANKSERYKQLVLRG KAMNNVENDNILKLKDQQGFSVRLVDHPCGTYPVIEINDQDDFLNVVRCLAYRCEQTHIQSSVHAQAVAGLIHWGLIQNI NIKERCQLIILHRSPYSSLPISVIPGKPTTKAWLEISQSWRLEHELTHLATERLAGEMRLNLFDELVADALGMLRALNVF SADLFRQGLGLNNDASTTTTGRVHTYLKGLNKNASRLACQYVLQRANELEQLLEAGIIPDERMALLNYLMNQKLDQPFTA NKSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37112; Mature: 36981
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSNISIEEYCRPFMQSTKKWPSLPLPVHPGIEWWQKWLQETACEGYFESLRSYLPQL CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WINPHDGANKSERYKQLVLRGKAMNNVENDNILKLKDQQGFSVRLVDHPCGTYPVIEIND CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEECC QDDFLNVVRCLAYRCEQTHIQSSVHAQAVAGLIHWGLIQNINIKERCQLIILHRSPYSSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCC PISVIPGKPTTKAWLEISQSWRLEHELTHLATERLAGEMRLNLFDELVADALGMLRALNV CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSADLFRQGLGLNNDASTTTTGRVHTYLKGLNKNASRLACQYVLQRANELEQLLEAGIIP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DERMALLNYLMNQKLDQPFTANKSS HHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSVSNISIEEYCRPFMQSTKKWPSLPLPVHPGIEWWQKWLQETACEGYFESLRSYLPQL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WINPHDGANKSERYKQLVLRGKAMNNVENDNILKLKDQQGFSVRLVDHPCGTYPVIEIND CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEECC QDDFLNVVRCLAYRCEQTHIQSSVHAQAVAGLIHWGLIQNINIKERCQLIILHRSPYSSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCC PISVIPGKPTTKAWLEISQSWRLEHELTHLATERLAGEMRLNLFDELVADALGMLRALNV CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSADLFRQGLGLNNDASTTTTGRVHTYLKGLNKNASRLACQYVLQRANELEQLLEAGIIP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DERMALLNYLMNQKLDQPFTANKSS HHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA