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The map label for this gene is selU [H]

Identifier: 33862878

GI number: 33862878

Start: 662326

End: 663426

Strand: Reverse

Name: selU [H]

Synonym: PMT0605

Alternate gene names: 33862878

Gene position: 663426-662326 (Counterclockwise)

Preceding gene: 33862881

Following gene: 33862877

Centisome position: 27.52

GC content: 52.68

Gene sequence:

>1101_bases
ATGTCAGGAATGGGTACCCATACTCCTTACTCGATCGAAAGATTCCGTCAGGCCAATGGTCCTGTTGTTGACGTTCGCAG
CCCAGCTGAATTCAATAAGGGACATTGGCCAGGTGCGATCAACCTTGCTCTCTTCAGCGATGAGCAACGGGCAGCGGTCG
GCATCACTTACAAAAAAAAAGGTCGTCAGCAAGCGATCAAGCTGGGTCTTGAGTTCACAGGCCCAAAACTGTCAGGTCTT
GCTGAAGCCCTGGTGAATCTCAGCAGAGATCCAACCACTGAATCAGAAGACACCTCTGCATCTGATCTACGCATTTACTG
CTGGCGAGGAGGCATGCGCTCTGCGAGTGTTGCTTGGCTAGCGGGTCTTGTGGATCTCAAGCCTTTGCTTCTGGAGGGTG
GATACAAGAGCTATCGGCGATGGGTGCTGCAACAATTTGAGCAAACCTGGCCTTTGCGATTACTCGGTGGACGAACAGGC
ACGGGCAAGACTGATCTACTCATTGCCATGGCACAACGAGGGGTCGCTGTCGTCAACCTTGAAGGTTTGGCGAACCATCG
GGGCAGCAGCTTTGGTGGGTTGGGCTTACCCCCACAACCAAGCACTGAACATTACGAAAATCTCCTTGCCGAATGTTTAC
AGCGCTGTCAAAACAGTTCTGCAGATGAAATCTGGCTGGAAGCGGAAAGTTCACAGGTGGGTCGCTGCAGAATCCCCCGA
GCACTTTTCCATCAGATGCAAATGGCACCAGTGCTGGAGATCAACCGTTCACTTGATGAACGGGTTGCTCAACTGGTTGA
TGTGTATGGCCAGCATGGCCGTGAGTCTTTGCAGGAAGCGACCCAACGCATCAGCCGCCGTTTAGGCCCACAGCGCACAC
GACAGGCCCTGGATGCAATCGCTCTTGGGGACTGGGACCAAGCCTGTCGAGCCATGTTGGATTACTACGACCGTTGCTAT
GACTACGAACTAAGCAGGACCCTTCAAAGACAAAGCGTGGATCTTTGCGGACTGAACACAACCAAAGCCGCTGAGATGTT
GATTGAACGAGAGCTTGTGAGATCAAGCCCAAAGCCACAGCTGGTTATGGACTCAACGTAA

Upstream 100 bases:

>100_bases
TGAATCGTTCCAGTAGTTCTTCAACGCTCTGGTTGGTGGAGGGGGGGGGACCGGAGATCATGGATCGAAACCGGCTCTTC
TGGCTCGCCGCTGGCCCACT

Downstream 100 bases:

>100_bases
GATCCATATCTTGTCGTAGAGATCAATGGCTAACGCGAACAAAACTGCGGCAATTCAGTTCACACGTGGTGTTGATGAAC
CTGTCGTTCCTGACATCAAA

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSGMGTHTPYSIERFRQANGPVVDVRSPAEFNKGHWPGAINLALFSDEQRAAVGITYKKKGRQQAIKLGLEFTGPKLSGL
AEALVNLSRDPTTESEDTSASDLRIYCWRGGMRSASVAWLAGLVDLKPLLLEGGYKSYRRWVLQQFEQTWPLRLLGGRTG
TGKTDLLIAMAQRGVAVVNLEGLANHRGSSFGGLGLPPQPSTEHYENLLAECLQRCQNSSADEIWLEAESSQVGRCRIPR
ALFHQMQMAPVLEINRSLDERVAQLVDVYGQHGRESLQEATQRISRRLGPQRTRQALDAIALGDWDQACRAMLDYYDRCY
DYELSRTLQRQSVDLCGLNTTKAAEMLIERELVRSSPKPQLVMDST

Sequences:

>Translated_366_residues
MSGMGTHTPYSIERFRQANGPVVDVRSPAEFNKGHWPGAINLALFSDEQRAAVGITYKKKGRQQAIKLGLEFTGPKLSGL
AEALVNLSRDPTTESEDTSASDLRIYCWRGGMRSASVAWLAGLVDLKPLLLEGGYKSYRRWVLQQFEQTWPLRLLGGRTG
TGKTDLLIAMAQRGVAVVNLEGLANHRGSSFGGLGLPPQPSTEHYENLLAECLQRCQNSSADEIWLEAESSQVGRCRIPR
ALFHQMQMAPVLEINRSLDERVAQLVDVYGQHGRESLQEATQRISRRLGPQRTRQALDAIALGDWDQACRAMLDYYDRCY
DYELSRTLQRQSVDLCGLNTTKAAEMLIERELVRSSPKPQLVMDST
>Mature_365_residues
SGMGTHTPYSIERFRQANGPVVDVRSPAEFNKGHWPGAINLALFSDEQRAAVGITYKKKGRQQAIKLGLEFTGPKLSGLA
EALVNLSRDPTTESEDTSASDLRIYCWRGGMRSASVAWLAGLVDLKPLLLEGGYKSYRRWVLQQFEQTWPLRLLGGRTGT
GKTDLLIAMAQRGVAVVNLEGLANHRGSSFGGLGLPPQPSTEHYENLLAECLQRCQNSSADEIWLEAESSQVGRCRIPRA
LFHQMQMAPVLEINRSLDERVAQLVDVYGQHGRESLQEATQRISRRLGPQRTRQALDAIALGDWDQACRAMLDYYDRCYD
YELSRTLQRQSVDLCGLNTTKAAEMLIERELVRSSPKPQLVMDST

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=359, Percent_Identity=32.5905292479109, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 40854; Mature: 40723

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMGTHTPYSIERFRQANGPVVDVRSPAEFNKGHWPGAINLALFSDEQRAAVGITYKKK
CCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHH
GRQQAIKLGLEFTGPKLSGLAEALVNLSRDPTTESEDTSASDLRIYCWRGGMRSASVAWL
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
AGLVDLKPLLLEGGYKSYRRWVLQQFEQTWPLRLLGGRTGTGKTDLLIAMAQRGVAVVNL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEE
EGLANHRGSSFGGLGLPPQPSTEHYENLLAECLQRCQNSSADEIWLEAESSQVGRCRIPR
CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH
ALFHQMQMAPVLEINRSLDERVAQLVDVYGQHGRESLQEATQRISRRLGPQRTRQALDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALGDWDQACRAMLDYYDRCYDYELSRTLQRQSVDLCGLNTTKAAEMLIERELVRSSPKPQ
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LVMDST
EEECCC
>Mature Secondary Structure 
SGMGTHTPYSIERFRQANGPVVDVRSPAEFNKGHWPGAINLALFSDEQRAAVGITYKKK
CCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHH
GRQQAIKLGLEFTGPKLSGLAEALVNLSRDPTTESEDTSASDLRIYCWRGGMRSASVAWL
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
AGLVDLKPLLLEGGYKSYRRWVLQQFEQTWPLRLLGGRTGTGKTDLLIAMAQRGVAVVNL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEE
EGLANHRGSSFGGLGLPPQPSTEHYENLLAECLQRCQNSSADEIWLEAESSQVGRCRIPR
CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH
ALFHQMQMAPVLEINRSLDERVAQLVDVYGQHGRESLQEATQRISRRLGPQRTRQALDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALGDWDQACRAMLDYYDRCYDYELSRTLQRQSVDLCGLNTTKAAEMLIERELVRSSPKPQ
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LVMDST
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA