| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yegM [C]
Identifier: 33862862
GI number: 33862862
Start: 646023
End: 646907
Strand: Reverse
Name: yegM [C]
Synonym: PMT0589
Alternate gene names: 33862862
Gene position: 646907-646023 (Counterclockwise)
Preceding gene: 33862863
Following gene: 33862861
Centisome position: 26.83
GC content: 53.67
Gene sequence:
>885_bases TTGATAACCGGAGGAATCTGCCTTGTTGTAGCTATTGGTGTCTGGAGCCTTACGCGTCGGCCTGAGACACCTCAAGAAAG TGCTGTGCTAGTTCCAGCTGCCAGACCAATTGAAGCTGTTGCAGCCTTGGGGCAACTTGAGCCCGCTGGTGATGTCCGTC GCTTGGCCGCCCCTGCTAGCGGGTTTGGTGGCACTCCACGGGTTGCCAAGCTCAGTGTTCGTGAAGGTGATGCGGTTAAG CGTGGTCAGGTTCTAGCAGAGTTCGACAACCGACCTAAAACTTTTGCTGATCTGGCAGCTGTCCAAGCTCGACTGGAGAC CCTCGAGGTTCAGTTGCGAATGCAACAGCGGGAGGTCACTCGTTATCAAAAAGCTGCCCTGGTTGGAGCTTCATCTCTGG TGGATTTGGAGGAAAAACAGGAAGAACTCGTCAAAATCGATGGCCAACGTCGGGAGGCTTTGGCTGAAATCAGCGGACTT GAGGCTGATCTCGCTGATAGTCAATTGAAGTCTCCCCTCGATGGTGTGGTGTTAAGGGTGCACACTCGCGTCGGGGAGCG TCCAGGTAGTGATGGCGTGATGGAAGTTGGCGCCAATCAGACCATGGAAGCCTTGATCGAAGTTTATGAGTCAGATGTGA ATCGAGTGAATGTTGGACAAGTTGTTCGCTTAACCAGTGAAAACGGTGGATTCGATGGAACTTTGATGGGTCGTGTGGAA CGCATTAGCCCCCAGGTTCGTCAGCGCAATGTGCTCTCAACTGATCCAACTGGTGATGCAGATGCCCGCGTAGTTGAAGT TCGGGTCAGTCTTGACCAGAACTCAGCTGCTCGGGTGAGAAGTCTCGCGGGGATGAAGGTGATCGCTCGCTTTCAGCCCT CGTGA
Upstream 100 bases:
>100_bases TGCTGGAGAAGGCCTTCAATCCTCAATGGGCGGATCGATACATCGAGGAGATCTTGTTCGAGGATCCACCTCCCCTTTAA GCAGCAAAACCTGGAGATGG
Downstream 100 bases:
>100_bases TGTCTGGCTTTTGGCAACGGCGGAGGATCCCTCTGGCTTGGTTGCTACTGAGTCGTCAACCTTTACGGCTTTTGGTTGCT CTGGCAGGAATCTGCTTCGC
Product: ABC transporter
Products: NA
Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; ABC-Transporter Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Transporter MFP Family; Membrane Fusion Protein Family Protein; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC Export System Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MITGGICLVVAIGVWSLTRRPETPQESAVLVPAARPIEAVAALGQLEPAGDVRRLAAPASGFGGTPRVAKLSVREGDAVK RGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQQREVTRYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEISGL EADLADSQLKSPLDGVVLRVHTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVNVGQVVRLTSENGGFDGTLMGRVE RISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAARVRSLAGMKVIARFQPS
Sequences:
>Translated_294_residues MITGGICLVVAIGVWSLTRRPETPQESAVLVPAARPIEAVAALGQLEPAGDVRRLAAPASGFGGTPRVAKLSVREGDAVK RGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQQREVTRYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEISGL EADLADSQLKSPLDGVVLRVHTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVNVGQVVRLTSENGGFDGTLMGRVE RISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAARVRSLAGMKVIARFQPS >Mature_294_residues MITGGICLVVAIGVWSLTRRPETPQESAVLVPAARPIEAVAALGQLEPAGDVRRLAAPASGFGGTPRVAKLSVREGDAVK RGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQQREVTRYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEISGL EADLADSQLKSPLDGVVLRVHTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVNVGQVVRLTSENGGFDGTLMGRVE RISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAARVRSLAGMKVIARFQPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31636; Mature: 31636
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGGICLVVAIGVWSLTRRPETPQESAVLVPAARPIEAVAALGQLEPAGDVRRLAAPAS CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCC GFGGTPRVAKLSVREGDAVKRGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQQREVT CCCCCCCEEEEEECCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEISGLEADLADSQLKSPLDGVVLRV HHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHEEEEE HTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVNVGQVVRLTSENGGFDGTLMGRVE EHHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHH RISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAARVRSLAGMKVIARFQPS HCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCC >Mature Secondary Structure MITGGICLVVAIGVWSLTRRPETPQESAVLVPAARPIEAVAALGQLEPAGDVRRLAAPAS CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCC GFGGTPRVAKLSVREGDAVKRGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQQREVT CCCCCCCEEEEEECCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEISGLEADLADSQLKSPLDGVVLRV HHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHEEEEE HTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVNVGQVVRLTSENGGFDGTLMGRVE EHHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHH RISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAARVRSLAGMKVIARFQPS HCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA