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The map label for this gene is 33862788

Identifier: 33862788

GI number: 33862788

Start: 563772

End: 564851

Strand: Reverse

Name: 33862788

Synonym: PMT0515

Alternate gene names: NA

Gene position: 564851-563772 (Counterclockwise)

Preceding gene: 33862790

Following gene: 33862785

Centisome position: 23.43

GC content: 44.54

Gene sequence:

>1080_bases
ATGGGCGGCATGAATTTAAAGAGACGGCTCTCCGTTGCTGCCTTGATTGTCATGGCGACTCCGTCTCCCCTTCAGGCAAT
GGCTTTGAGGGTGGGAGTAAGTGGTTCGCCACCATTTGTGGACAAGAAAGCTGGTGTATATGAGGGAATTAGTGTTGAAG
TTTGGCGTCAAATTGCTCATGCAGAGAAGCTTGAATACTTTCTCATTCCATATCCCAACATAGATTCGAACATCAAGGCG
GTGGCTGATGGAAAGATTGATTTAGCCATCGGGCCTATCAGCATTACGCCAGATCGAGTAGCAAGAAATGGGATTGAATT
CACGCAACCTTATTTCTATGCAGAGGAGGGTGTTTTAGTACCATCACAGCCACCCGGACTATGGGCAAGGATCAAGCCTC
TCTTTGGTGTCGCTGCTTTATCTTCTATCACTTTCTTGCTCTTTACACTTTTCTGTGTAGGCAATCTGATTTGGCTTGCA
GAGCGAAAACGTAACCCTGAACATTTTCCGCCTCAATATATAAAGGGTCTAGGGAATGGGATTTGGTTTGCCTTGGTTAC
ACTCACAACCGTAGGTTACGGAGACCGTGCACCTTTAACGAAAGCAGGAAGGTCTATAGCAGGGGTCTGGATGGTAATTT
CGCTAGCATCAGTGTCGACAATTACTGCAGGATTGGCTTCGGCATTTACCGTCTCGCTATCTCAGACGCAATTGTCTGGG
GTCATGAAACCATCGGATTTGGATGGTGAATTAATTGGTGTAGTTACTGGCACCACAGGTGTATCTTTAGCCAGATCATA
TGGTGCACGGCCGTTTCCAGTACCAACCCTTAAGGAAGCTATTCATCTAATCAAGAGAAATAAAGTCTCAGGAGTGATCT
CAGACACACCTATCTTGAGTTATTATATGAAAAATAGTCCAGACAAGTCTCTAACATTAGCACCTTTTAGACTTTCCCTT
CAGACCTATGGATTTGTCGTGCCTAGTGATAGTCCATTGGAACGTTTGATTAATATTGAACTCCTTCGTCTTGAACGCAG
TCATCAAGTTAAAGCGATAAGCGACAGGATTTTGAAATAA

Upstream 100 bases:

>100_bases
CTTACAACCTTTCTTGTCGTGGTGGTGTGGATAAGAATCGTACGCAGTCCTATGGCAGCCTTAGGTGAGATGGGCTTTTC
AGTTCGTGTATAGGCGATTG

Downstream 100 bases:

>100_bases
TTCCTCTGATCTAATACTCACAAACATTTAGTTTTGCAGCTGACACCTCAGCACGGCTAGCGCTTCATCGGGTAGTCCCA
AAAATTGATCCAGCCATGCG

Product: GIC family ligand gated channel

Products: NA

Alternate protein names: Ionotropic Glutamate Receptor; Ligand-Gated Ion Channel Family Protein; Ion Transport 2 Domain-Containing Protein; Ion Channel Family; Glutamate-Gated Potassium Channel; Ligand Gated Channel; Ligand-Gated Ion Channel Periplasmic Domain

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGGMNLKRRLSVAALIVMATPSPLQAMALRVGVSGSPPFVDKKAGVYEGISVEVWRQIAHAEKLEYFLIPYPNIDSNIKA
VADGKIDLAIGPISITPDRVARNGIEFTQPYFYAEEGVLVPSQPPGLWARIKPLFGVAALSSITFLLFTLFCVGNLIWLA
ERKRNPEHFPPQYIKGLGNGIWFALVTLTTVGYGDRAPLTKAGRSIAGVWMVISLASVSTITAGLASAFTVSLSQTQLSG
VMKPSDLDGELIGVVTGTTGVSLARSYGARPFPVPTLKEAIHLIKRNKVSGVISDTPILSYYMKNSPDKSLTLAPFRLSL
QTYGFVVPSDSPLERLINIELLRLERSHQVKAISDRILK

Sequences:

>Translated_359_residues
MGGMNLKRRLSVAALIVMATPSPLQAMALRVGVSGSPPFVDKKAGVYEGISVEVWRQIAHAEKLEYFLIPYPNIDSNIKA
VADGKIDLAIGPISITPDRVARNGIEFTQPYFYAEEGVLVPSQPPGLWARIKPLFGVAALSSITFLLFTLFCVGNLIWLA
ERKRNPEHFPPQYIKGLGNGIWFALVTLTTVGYGDRAPLTKAGRSIAGVWMVISLASVSTITAGLASAFTVSLSQTQLSG
VMKPSDLDGELIGVVTGTTGVSLARSYGARPFPVPTLKEAIHLIKRNKVSGVISDTPILSYYMKNSPDKSLTLAPFRLSL
QTYGFVVPSDSPLERLINIELLRLERSHQVKAISDRILK
>Mature_358_residues
GGMNLKRRLSVAALIVMATPSPLQAMALRVGVSGSPPFVDKKAGVYEGISVEVWRQIAHAEKLEYFLIPYPNIDSNIKAV
ADGKIDLAIGPISITPDRVARNGIEFTQPYFYAEEGVLVPSQPPGLWARIKPLFGVAALSSITFLLFTLFCVGNLIWLAE
RKRNPEHFPPQYIKGLGNGIWFALVTLTTVGYGDRAPLTKAGRSIAGVWMVISLASVSTITAGLASAFTVSLSQTQLSGV
MKPSDLDGELIGVVTGTTGVSLARSYGARPFPVPTLKEAIHLIKRNKVSGVISDTPILSYYMKNSPDKSLTLAPFRLSLQ
TYGFVVPSDSPLERLINIELLRLERSHQVKAISDRILK

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38948; Mature: 38817

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGMNLKRRLSVAALIVMATPSPLQAMALRVGVSGSPPFVDKKAGVYEGISVEVWRQIAH
CCCCCHHHHHHEEEEEEEECCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AEKLEYFLIPYPNIDSNIKAVADGKIDLAIGPISITPDRVARNGIEFTQPYFYAEEGVLV
HHHCCEEEEECCCCCCCCEEEECCEEEEEEECEECCHHHHHHCCCCCCCCEEEECCCEEC
PSQPPGLWARIKPLFGVAALSSITFLLFTLFCVGNLIWLAERKRNPEHFPPQYIKGLGNG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCHHHHHHCCCH
IWFALVTLTTVGYGDRAPLTKAGRSIAGVWMVISLASVSTITAGLASAFTVSLSQTQLSG
HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHC
VMKPSDLDGELIGVVTGTTGVSLARSYGARPFPVPTLKEAIHLIKRNKVSGVISDTPILS
CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHH
YYMKNSPDKSLTLAPFRLSLQTYGFVVPSDSPLERLINIELLRLERSHQVKAISDRILK
HHHCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
GGMNLKRRLSVAALIVMATPSPLQAMALRVGVSGSPPFVDKKAGVYEGISVEVWRQIAH
CCCCHHHHHHEEEEEEEECCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AEKLEYFLIPYPNIDSNIKAVADGKIDLAIGPISITPDRVARNGIEFTQPYFYAEEGVLV
HHHCCEEEEECCCCCCCCEEEECCEEEEEEECEECCHHHHHHCCCCCCCCEEEECCCEEC
PSQPPGLWARIKPLFGVAALSSITFLLFTLFCVGNLIWLAERKRNPEHFPPQYIKGLGNG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCHHHHHHCCCH
IWFALVTLTTVGYGDRAPLTKAGRSIAGVWMVISLASVSTITAGLASAFTVSLSQTQLSG
HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHC
VMKPSDLDGELIGVVTGTTGVSLARSYGARPFPVPTLKEAIHLIKRNKVSGVISDTPILS
CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHH
YYMKNSPDKSLTLAPFRLSLQTYGFVVPSDSPLERLINIELLRLERSHQVKAISDRILK
HHHCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA