| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pstS [H]
Identifier: 33862781
GI number: 33862781
Start: 558840
End: 559823
Strand: Reverse
Name: pstS [H]
Synonym: PMT0508
Alternate gene names: 33862781
Gene position: 559823-558840 (Counterclockwise)
Preceding gene: 33862783
Following gene: 33862778
Centisome position: 23.22
GC content: 52.54
Gene sequence:
>984_bases ATGTCGTTCTCAAAGAAGGCCCTTTTGCTCCTTTCTGCGGTTGTTCTCGGTGTTGGCATCACGGCTTGCAGCACCTCAGG GTCATCCGGCCGTCTAAGCGGAGCTGGTGCAACCTTCCCTGCGAAGATCTATACCCGCTGGTTCTCTGAGCTGGCCACGG CTGGGGGGCCGCAGGTCAACTATCAGGCTGTTGGTTCTGGATCTGGTCGTAAAGCCTTCATTGATCAGACCGTGAGCTTC GCGGCATCGGATGATCCGATGAAGCAGGAGGATATTGACAAGGTTCAGCGTGGCTTGGTGCAAATTCCCATGGTGGGAGG CACCATCGCCTTTGGCTACAACCGAGACTGCGATCTGAAGTTGACCCAAAAGCAAGCGGTTGAAGTTGCTCTTGGCAGCA TCACTGATTGGGATCAGCTCAATTGCCCTGCAGGCAAGATCACTTGGGTGCATCGCTCTGATGGCTCTGGCACCACCAAG GCATTTACCAATTCCATGCAGGCCTTTTCTAAACAATGGACCCTGGGAACCGGTAAATCAGTGGAATGGCCAACAGGGGT GGGCGCCAAAGGGAATTCAGGTGTTGCTGGTGTGATTACAAATACACCTGGCGCGATCGGTTATGTGAATCAGTCATTCA TCAAAGGAAAGGTCAAAGCTGCTGCACTTGAAAATCTCTCTGGCGAATTCCTCAAGCCAAGTGTGAATACAGGAGCTGCT GCCCTCAATGGCATCCAGTTAGACGCCAATCTCGCCGGTACCAATCCAAATCCCACAGCCAAAGGGGCTTATCCGATTGC CACTCTCACCTGGTTGTTGGCATACAAAACTGGTAATGGCAGCAACCTTGACGCACTCAAAACAACCTTTGACTACATGT TGAGTGATGAGGCTCAGGCGCAAACTGATGGGTTGGGTTTCGTTCCCCTGCAGGGTGAAATTCTCTCCAAGGCTCGTAGT GCCGTTGACTTGGTCAGCAAGTGA
Upstream 100 bases:
>100_bases CTAACCGATTCATCAAGATCTCCTAGTCAATTGCTGACTTTTTCCCATCAAAGGGCATTTCTTATCTAGTTATGGGTTGA TGAAATCCTTCAGGGGCCCC
Downstream 100 bases:
>100_bases TCAAATCACGAGACTCGTTTAAGTCGTCTTATTAGAATCATTAAAAGGGAAGCTAATAACTTCCTTTAAATGTCTCCCTC TTGTGTACCCTATATTGATT
Product: ABC transporter substrate-binding protein, phosphate
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSFSKKALLLLSAVVLGVGITACSTSGSSGRLSGAGATFPAKIYTRWFSELATAGGPQVNYQAVGSGSGRKAFIDQTVSF AASDDPMKQEDIDKVQRGLVQIPMVGGTIAFGYNRDCDLKLTQKQAVEVALGSITDWDQLNCPAGKITWVHRSDGSGTTK AFTNSMQAFSKQWTLGTGKSVEWPTGVGAKGNSGVAGVITNTPGAIGYVNQSFIKGKVKAAALENLSGEFLKPSVNTGAA ALNGIQLDANLAGTNPNPTAKGAYPIATLTWLLAYKTGNGSNLDALKTTFDYMLSDEAQAQTDGLGFVPLQGEILSKARS AVDLVSK
Sequences:
>Translated_327_residues MSFSKKALLLLSAVVLGVGITACSTSGSSGRLSGAGATFPAKIYTRWFSELATAGGPQVNYQAVGSGSGRKAFIDQTVSF AASDDPMKQEDIDKVQRGLVQIPMVGGTIAFGYNRDCDLKLTQKQAVEVALGSITDWDQLNCPAGKITWVHRSDGSGTTK AFTNSMQAFSKQWTLGTGKSVEWPTGVGAKGNSGVAGVITNTPGAIGYVNQSFIKGKVKAAALENLSGEFLKPSVNTGAA ALNGIQLDANLAGTNPNPTAKGAYPIATLTWLLAYKTGNGSNLDALKTTFDYMLSDEAQAQTDGLGFVPLQGEILSKARS AVDLVSK >Mature_326_residues SFSKKALLLLSAVVLGVGITACSTSGSSGRLSGAGATFPAKIYTRWFSELATAGGPQVNYQAVGSGSGRKAFIDQTVSFA ASDDPMKQEDIDKVQRGLVQIPMVGGTIAFGYNRDCDLKLTQKQAVEVALGSITDWDQLNCPAGKITWVHRSDGSGTTKA FTNSMQAFSKQWTLGTGKSVEWPTGVGAKGNSGVAGVITNTPGAIGYVNQSFIKGKVKAAALENLSGEFLKPSVNTGAAA LNGIQLDANLAGTNPNPTAKGAYPIATLTWLLAYKTGNGSNLDALKTTFDYMLSDEAQAQTDGLGFVPLQGEILSKARSA VDLVSK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=308, Percent_Identity=33.4415584415584, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 34002; Mature: 33871
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSKKALLLLSAVVLGVGITACSTSGSSGRLSGAGATFPAKIYTRWFSELATAGGPQVN CCCCHHHHHHHHHHHHHCCHHEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEE YQAVGSGSGRKAFIDQTVSFAASDDPMKQEDIDKVQRGLVQIPMVGGTIAFGYNRDCDLK EEEECCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCEEEECCCCCCCEE LTQKQAVEVALGSITDWDQLNCPAGKITWVHRSDGSGTTKAFTNSMQAFSKQWTLGTGKS EHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC VEWPTGVGAKGNSGVAGVITNTPGAIGYVNQSFIKGKVKAAALENLSGEFLKPSVNTGAA CCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH ALNGIQLDANLAGTNPNPTAKGAYPIATLTWLLAYKTGNGSNLDALKTTFDYMLSDEAQA HCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHH QTDGLGFVPLQGEILSKARSAVDLVSK HCCCEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure SFSKKALLLLSAVVLGVGITACSTSGSSGRLSGAGATFPAKIYTRWFSELATAGGPQVN CCCHHHHHHHHHHHHHCCHHEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEE YQAVGSGSGRKAFIDQTVSFAASDDPMKQEDIDKVQRGLVQIPMVGGTIAFGYNRDCDLK EEEECCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCEEEECCCCCCCEE LTQKQAVEVALGSITDWDQLNCPAGKITWVHRSDGSGTTKAFTNSMQAFSKQWTLGTGKS EHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC VEWPTGVGAKGNSGVAGVITNTPGAIGYVNQSFIKGKVKAAALENLSGEFLKPSVNTGAA CCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH ALNGIQLDANLAGTNPNPTAKGAYPIATLTWLLAYKTGNGSNLDALKTTFDYMLSDEAQA HCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHH QTDGLGFVPLQGEILSKARSAVDLVSK HCCCEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]