| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862734
Identifier: 33862734
GI number: 33862734
Start: 515106
End: 515660
Strand: Reverse
Name: 33862734
Synonym: PMT0461
Alternate gene names: NA
Gene position: 515660-515106 (Counterclockwise)
Preceding gene: 33862736
Following gene: 33862728
Centisome position: 21.39
GC content: 51.17
Gene sequence:
>555_bases ATGGCAGAACAGGATCTCTACCGATTCCTCGACAAGGTGCAACAGCTTCAAAAAATGATTCAGTCGCTAGAAACTGTCCC TGGCCGACGAGAGCTGCTAGCCGCTTGTGGAGATCACAATCAAGTGGTGAAGTTAGCTCGATCTTGGGGCTTTGAGATTG GACGCCGTTGGGGTGAACTTGAGCCTGTCGAGCAGCTTTCTTCCGATGCCAATCTACTAACGCGGCCATTACCTCCACAA GGGCAGGAACAACAGCATCTTCTCCACGCTGGTTCAAATTGGCGCCTAGAGCTAATTCTCTCTTGTGCTGCATCTAGTCC AGAGGGGTTCTGGTATGACCAGGCTGATCACGAATGGATTGTGCTAATGAAGGGAAGTGCACGTATGCAACTGAAAGATC CCGATGTGTGTGTTGATCTCAGCGTGGGAGATCAGCTGCATTTGGCCCCTCACCGTCTGCATCGTGTGGAACGAACTGAT CCTCACCCTGGGACAATTTGGTTGGCTTTGTTCTGGAACGAGCAGAAAGGGCCGGATCAATTGTCGCTCTCTTAA
Upstream 100 bases:
>100_bases TGTGATGATCAAAGCGGATGAGGCAACCAAAAAATTTCGCTGATACCTTGAACAATTTGTTATCAGCATCATTAGTTGGA AATGAATTCTGGAGAAGTGG
Downstream 100 bases:
>100_bases CCAGCCAATAAGCCCCGGCCAAAGCAATCGAGGCAATCCCCAGTCCAGCCAGTAACTGAGGTTTATCATCAGATCCTGGT GGCAACACGATCACTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Family Protein; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAEQDLYRFLDKVQQLQKMIQSLETVPGRRELLAACGDHNQVVKLARSWGFEIGRRWGELEPVEQLSSDANLLTRPLPPQ GQEQQHLLHAGSNWRLELILSCAASSPEGFWYDQADHEWIVLMKGSARMQLKDPDVCVDLSVGDQLHLAPHRLHRVERTD PHPGTIWLALFWNEQKGPDQLSLS
Sequences:
>Translated_184_residues MAEQDLYRFLDKVQQLQKMIQSLETVPGRRELLAACGDHNQVVKLARSWGFEIGRRWGELEPVEQLSSDANLLTRPLPPQ GQEQQHLLHAGSNWRLELILSCAASSPEGFWYDQADHEWIVLMKGSARMQLKDPDVCVDLSVGDQLHLAPHRLHRVERTD PHPGTIWLALFWNEQKGPDQLSLS >Mature_183_residues AEQDLYRFLDKVQQLQKMIQSLETVPGRRELLAACGDHNQVVKLARSWGFEIGRRWGELEPVEQLSSDANLLTRPLPPQG QEQQHLLHAGSNWRLELILSCAASSPEGFWYDQADHEWIVLMKGSARMQLKDPDVCVDLSVGDQLHLAPHRLHRVERTDP HPGTIWLALFWNEQKGPDQLSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21045; Mature: 20914
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQDLYRFLDKVQQLQKMIQSLETVPGRRELLAACGDHNQVVKLARSWGFEIGRRWGEL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCC EPVEQLSSDANLLTRPLPPQGQEQQHLLHAGSNWRLELILSCAASSPEGFWYDQADHEWI CHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCEE VLMKGSARMQLKDPDVCVDLSVGDQLHLAPHRLHRVERTDPHPGTIWLALFWNEQKGPDQ EEEECCCEEEECCCCEEEEECCCCEEECCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCC LSLS CCCC >Mature Secondary Structure AEQDLYRFLDKVQQLQKMIQSLETVPGRRELLAACGDHNQVVKLARSWGFEIGRRWGEL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCC EPVEQLSSDANLLTRPLPPQGQEQQHLLHAGSNWRLELILSCAASSPEGFWYDQADHEWI CHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCEE VLMKGSARMQLKDPDVCVDLSVGDQLHLAPHRLHRVERTDPHPGTIWLALFWNEQKGPDQ EEEECCCEEEECCCCEEEEECCCCEEECCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCC LSLS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA