| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862693
Identifier: 33862693
GI number: 33862693
Start: 469434
End: 470801
Strand: Reverse
Name: 33862693
Synonym: PMT0420
Alternate gene names: NA
Gene position: 470801-469434 (Counterclockwise)
Preceding gene: 33862704
Following gene: 33862692
Centisome position: 19.53
GC content: 55.41
Gene sequence:
>1368_bases GTGAAGCTTCCAGCCCTACTGATCAATCTTGTGCCTCGCTCCCCTGCCTTAATTGGCCGGGTAGCACTCATCACAGGATC CTTCGTCCTCGGTCAGTGGGTCTTCACTGATGTGATTCATCTGCCTGGCGGTGGTCTTGGCTTGATGGTTGCTGGTGCGG GCGTCTGGTGGTTGTCAAGGCCCTCAATACCGGCCCGTTTTGATGCACCAGATTCTGTGCAGGGCTGGATCCGTCGCTGC AAAGAGGTCCTTGATCAGTTTGAGGACCTAGAAGAGGGTGAGGACGATGTGGTTGCGCTTCGCCAACAGCGCAGCGAGGC CCTTGATGCCGTTCTACAGCGTTCCGAACCTCAAAAAGTTTCTTTTGTGAATTCCGGAGAGGGTTCTCTTGAGGATCATC CCGATGTTCAGACAGCCATTGCAGGATCCACTCCACTGAGCATCAGCTGGGCGCGGCCTCTCTCTCAGACAGGCGAGTCT TGGGTCTGGCCCGCAGCTCTACAAGAGCAGGATGTCTTGCTCTATGTCTTACCTTTGCCGTTGATGGCAGCAGACCTTCT TTGGTTAGAGAGGGTGCCAGCCAATCAACCCATCTGGCTGATCGTCTCTTGGCAAGATTCATCTACTTGGGTCGATCAGC TGCAGGCACTTCAAGCTCAGTTGCCACAACGCTTGAGCGGACAGGTGCTTCGTTGGACAGGCAATCAAGACGATCTTTCA GAAGCCCTTGCGCCGGTGAGACGTCTGTTAGAGCACCCTCAGCGAAATCTTGAGATCACGCGTAAGCGCTTGTTGGGCAG TCTGCACCGCAATTGGCAAGCCGAGTTAGAGCAACTTCGCAGGCAGAAGTTCCTTGGACTACAACAGCGCACTCAATGGT TGGTTGCAGGAGCTGTTTTTGCCTCTCCTTTACCCACAACGGATCTTCTAGCCGTGGCTGTGGTCAACGGCTTGATGATT AAAGAAATGGCGGGGATTTGGAAGTGTTCCTTGAAGCCAGAGGTTCTGCAGTTGGCAGCTCGCCAGTTGGCTGGGGCGGC TCTAGCCCAGGGAGTGGTGGAGTGGAGTGGCCAAGCTCTATTGGGCGTAGCCAAACTTGACGGCAGCAGCTGGCTTGCAG CGGGTACTGTTCAGGCGCTCAGCGCTGCTTACCTAACCCGTGTTGTTGGACGCTCAATGGCCGATTGGCTGGCATTGAAC AGTGGCGTTGCTGAGCCGGATTTGGAAGCCTTAAAGATTCAGGCACCGCTGCTGGTTGCTAAGGCTGCAGAGCAGGAACG TCTCGATTGGTCAAGCTTTTCACAACAGGGAATCAGCTGGATCAAGGAGTTGGCTCGCCAACCAGGCGCCTCGCCGAACC CTGCGTAG
Upstream 100 bases:
>100_bases CCATTTGGGGAGCCAAATGAACGCAAAGTCTTCTCTCAGCCATTAATTGAACGAAGAAGGTCACGTAGGCTGGTAAGGCT TGCACGACAGGTGGTGCCCC
Downstream 100 bases:
>100_bases TGCGCAAGCAAACTTCATGAAGTTTGCTTGCGCACTACGTCGCAATGTGAGGAAAGCACTTGCAGCAAGTGAGCTTTGCT GCCCAATTTTTATATGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKLPALLINLVPRSPALIGRVALITGSFVLGQWVFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEDLEEGEDDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPDVQTAIAGSTPLSISWARPLSQTGES WVWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLS EALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQKFLGLQQRTQWLVAGAVFASPLPTTDLLAVAVVNGLMI KEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTVQALSAAYLTRVVGRSMADWLALN SGVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASPNPA
Sequences:
>Translated_455_residues MKLPALLINLVPRSPALIGRVALITGSFVLGQWVFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEDLEEGEDDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPDVQTAIAGSTPLSISWARPLSQTGES WVWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLS EALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQKFLGLQQRTQWLVAGAVFASPLPTTDLLAVAVVNGLMI KEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTVQALSAAYLTRVVGRSMADWLALN SGVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASPNPA >Mature_455_residues MKLPALLINLVPRSPALIGRVALITGSFVLGQWVFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEDLEEGEDDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPDVQTAIAGSTPLSISWARPLSQTGES WVWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLS EALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQKFLGLQQRTQWLVAGAVFASPLPTTDLLAVAVVNGLMI KEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTVQALSAAYLTRVVGRSMADWLALN SGVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASPNPA
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49846; Mature: 49846
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPALLINLVPRSPALIGRVALITGSFVLGQWVFTDVIHLPGGGLGLMVAGAGVWWLSR CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCCEEEECC PSIPARFDAPDSVQGWIRRCKEVLDQFEDLEEGEDDVVALRQQRSEALDAVLQRSEPQKV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE SFVNSGEGSLEDHPDVQTAIAGSTPLSISWARPLSQTGESWVWPAALQEQDVLLYVLPLP EEEECCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHCCCCCCCCHHCCCCCEEEEEECHH LMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLS HHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEECCCHHHHH EALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQKFLGLQQRTQWLVAGAVF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ASPLPTTDLLAVAVVNGLMIKEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQAL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE LGVAKLDGSSWLAAGTVQALSAAYLTRVVGRSMADWLALNSGVAEPDLEALKIQAPLLVA EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCHHHH KAAEQERLDWSSFSQQGISWIKELARQPGASPNPA HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLPALLINLVPRSPALIGRVALITGSFVLGQWVFTDVIHLPGGGLGLMVAGAGVWWLSR CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCCEEEECC PSIPARFDAPDSVQGWIRRCKEVLDQFEDLEEGEDDVVALRQQRSEALDAVLQRSEPQKV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE SFVNSGEGSLEDHPDVQTAIAGSTPLSISWARPLSQTGESWVWPAALQEQDVLLYVLPLP EEEECCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHCCCCCCCCHHCCCCCEEEEEECHH LMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLS HHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEECCCHHHHH EALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQKFLGLQQRTQWLVAGAVF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ASPLPTTDLLAVAVVNGLMIKEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQAL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE LGVAKLDGSSWLAAGTVQALSAAYLTRVVGRSMADWLALNSGVAEPDLEALKIQAPLLVA EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCHHHH KAAEQERLDWSSFSQQGISWIKELARQPGASPNPA HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA