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The map label for this gene is dnaQ

Identifier: 33862659

GI number: 33862659

Start: 434770

End: 435699

Strand: Reverse

Name: dnaQ

Synonym: PMT0386

Alternate gene names: NA

Gene position: 435699-434770 (Counterclockwise)

Preceding gene: 33862662

Following gene: 33862658

Centisome position: 18.07

GC content: 52.47

Gene sequence:

>930_bases
ATGGGTGCGGGAGAATACAAGCAATCGATTGATGAACTCGGCGTGGGGGAAGCAAAGCAGCATCTCTTTGGAGCTGGTCA
GTTGGATCTTCTCCCAGATCTCAATGCAGAAGAGGCAGTTGTCACTCCTTCAAAAGCTGTCACTACTTCAAAGGCTGTCT
CTTTACCGCAACCTCATGCACCAGTAGCACTGCCTTCTTTGCATCGAGAAGCTTTGAGCTCACTGCCAGAGATGCTGCTG
ATCATCGATACGGAAACCACTGGATTGGATCCGAAGCGAGGTCAATGCCTAGAGGTTGGCGCCATCCTTTTCCATGCACC
GCAGCGTGCTGTGCTTGCCCAGCATTCCTTTTTGCTACCTGTGGAAACCAATGCGGCTGAATCAATCAATCGCATCCCCG
CTGAGGTCACACGCTTGGATCAACCTTGGCGACAAGGGCTGGACTATTTCCAAGCCTTACTGGATGCCGCTGATCTGTTA
GTTGCTCACAATGCTGGCTTCGATCGTCAGTGGTTCGGAAAGGATCAGCTTCCAGCTGTCTCCAAGCCCTGGCTGTGCAC
GATGGAAGACATCGCTTGGCCAGTTGATCGTCAGCTTCGTTCAAGGCCTTCTGTAAGAGATTTGGCTCTCGCTTATGGCG
TGCCAGTATGGGCCGCTCATCGTGCTCTCACCGACTGCATTTATCTCGCCGAGGTGTTCGCCCGTTGCAAGGATCTCGAA
ACGCTCCTGCTTCATGGGCTAGAGCCAAGGCGTTTGATGCGTGCCCAGGTGTCTTATGAACAAAGACACCTGGCCAAAGA
TGCTGGCTTTCGTTGGAATGATCCAATTCAAGGTGCCTGGACCCGACGCTTAAGTGATCGAGAGGCCGCCAAGCTTGACT
TCCAAGTGGTTGCTATTGATCAACAAGAGGAGCAGCCATTGAGTGCATAA

Upstream 100 bases:

>100_bases
TTGCCATTTTGATCAACCAGATCAATGGCAGGAGCCTTATCACCAACTTGAAGGGCCATGCAGAAGCTCGCATCTATGGC
GCACCCTAGAGAGCCCCTTG

Downstream 100 bases:

>100_bases
CGTTGCCTTCAATGGCGTCATCCGTTTGAGAAAAGGTTGAGCTGCCAAACATCCTTGCTCCGAGAGAGTTGAATTCTGAT
TGATTCCCTTAGTCAAGAGC

Product: DNA polymerase III, epsilon subunit

Products: diphosphate; DNAn+1

Alternate protein names: Exonuclease; Exonuclease RNAse T/DNA Polymerase III; Exonuclease RNAse T And DNA Polymerase III

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGAGEYKQSIDELGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVTTSKAVSLPQPHAPVALPSLHREALSSLPEMLL
IIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLL
VAHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYLAEVFARCKDLE
TLLLHGLEPRRLMRAQVSYEQRHLAKDAGFRWNDPIQGAWTRRLSDREAAKLDFQVVAIDQQEEQPLSA

Sequences:

>Translated_309_residues
MGAGEYKQSIDELGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVTTSKAVSLPQPHAPVALPSLHREALSSLPEMLL
IIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLL
VAHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYLAEVFARCKDLE
TLLLHGLEPRRLMRAQVSYEQRHLAKDAGFRWNDPIQGAWTRRLSDREAAKLDFQVVAIDQQEEQPLSA
>Mature_308_residues
GAGEYKQSIDELGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVTTSKAVSLPQPHAPVALPSLHREALSSLPEMLLI
IDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLLV
AHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYLAEVFARCKDLET
LLLHGLEPRRLMRAQVSYEQRHLAKDAGFRWNDPIQGAWTRRLSDREAAKLDFQVVAIDQQEEQPLSA

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 34341; Mature: 34210

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGEYKQSIDELGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVTTSKAVSLPQPHA
CCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCC
PVALPSLHREALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLP
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCEEEE
VETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLLVAHNAGFDRQWFGKDQLPAV
ECCCHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYLAEVFARCKDLE
CCCCEEEHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLHGLEPRRLMRAQVSYEQRHLAKDAGFRWNDPIQGAWTRRLSDREAAKLDFQVVAID
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHEEEEEEEEC
QQEEQPLSA
CCCCCCCCC
>Mature Secondary Structure 
GAGEYKQSIDELGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVTTSKAVSLPQPHA
CCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCC
PVALPSLHREALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLP
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCEEEE
VETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLLVAHNAGFDRQWFGKDQLPAV
ECCCHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYLAEVFARCKDLE
CCCCEEEHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLHGLEPRRLMRAQVSYEQRHLAKDAGFRWNDPIQGAWTRRLSDREAAKLDFQVVAID
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHEEEEEEEEC
QQEEQPLSA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA