| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862601
Identifier: 33862601
GI number: 33862601
Start: 375032
End: 375979
Strand: Reverse
Name: 33862601
Synonym: PMT0328
Alternate gene names: NA
Gene position: 375979-375032 (Counterclockwise)
Preceding gene: 33862602
Following gene: 33862597
Centisome position: 15.6
GC content: 41.98
Gene sequence:
>948_bases ATGGCTCGTTCAACATCTTCTAGGAGCACAACCAAAGTTGTTGCCACCCCATTAGCAACTGCTTCCACAAATCGCACAAC CACAACTTTGATTTCGGAACAAGCTGTGGAATTAAACACTGCTGCAACTGTTGAATCACCTATCCAGCCCGAAGCATCTT CTTCAAGAGTGGATGCGCTGACTCCCTACTTCGAAAATTTTGGGCCTGACCCAATCCTTGGCAATCACATTGAAAACAAC AATTTAGAATATTTGAATGACTTCATTAATGAGAACCAAATTGATCCAACATTGGGAATAGATATCCGCAATGAATTTGT TAATAACGTAATGAATTCAGTAGATGAATTGCAAGATCTCATCATGAGTCAAGCACTAGGACACACAACGGGCGACTATC ATATGCATACAGAAGAAGGTGATGGATACACAAGAACGACAACGGTCCGACCTGACGGAAGCGTCCAAGGCACAGAAACC AAAAACGCCAATGGGACAAGCCACTATGAGAATGACGTCGTAGATCAGTACAAAGATAAAGATGGCAATATAATTACCAA GGAGGAATACGACAATCTAAACAAACAAGAGGAAAAAGAAGAAGAACCAGAGAAGGATGAGTCCAATGATGACAATCAAT CAGAGACGGAAGGTAATGAATCTGAAGAGCCAGAGGGAGGTGAAGGAGATGACATTACACCCGAATCCGAAGCCAGAGGG CGCTGGTATATTAGCGAACAAATTGATGAGTTAACTGGCAACCTAAAAGAAGAGATGTTTGTTAATTCTCAATTCGAGAT TATGGATGCTTCGATTGCATTTGAACTAGAACCCATGGTTCATGAGCAGATTGGAAATTCTCAAGCCAATCACTCGCCAA CTCTCAACCAAGTAGAAGAGTTACCAATGCTAACAGGAATACGAACAGCAACGGAGGCTATTTTCTGA
Upstream 100 bases:
>100_bases GGCATCTGTGAAGCAAGTCACAAGCCGAGCAACCTAATTAAGCGATTGTTTGTGCATCGGAGAGAACCCTTCGATGCAAA AACCTTACCCATAGAAACCA
Downstream 100 bases:
>100_bases TTTAGATCATGCACATATATCGCCCTTATTCTACAGGGCGATATATGTCCAGAACATGGCTTCTACGCTTACGCAAATCA ACTAATAGATTTTCCATATA
Product: bromo domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MARSTSSRSTTKVVATPLATASTNRTTTTLISEQAVELNTAATVESPIQPEASSSRVDALTPYFENFGPDPILGNHIENN NLEYLNDFINENQIDPTLGIDIRNEFVNNVMNSVDELQDLIMSQALGHTTGDYHMHTEEGDGYTRTTTVRPDGSVQGTET KNANGTSHYENDVVDQYKDKDGNIITKEEYDNLNKQEEKEEEPEKDESNDDNQSETEGNESEEPEGGEGDDITPESEARG RWYISEQIDELTGNLKEEMFVNSQFEIMDASIAFELEPMVHEQIGNSQANHSPTLNQVEELPMLTGIRTATEAIF
Sequences:
>Translated_315_residues MARSTSSRSTTKVVATPLATASTNRTTTTLISEQAVELNTAATVESPIQPEASSSRVDALTPYFENFGPDPILGNHIENN NLEYLNDFINENQIDPTLGIDIRNEFVNNVMNSVDELQDLIMSQALGHTTGDYHMHTEEGDGYTRTTTVRPDGSVQGTET KNANGTSHYENDVVDQYKDKDGNIITKEEYDNLNKQEEKEEEPEKDESNDDNQSETEGNESEEPEGGEGDDITPESEARG RWYISEQIDELTGNLKEEMFVNSQFEIMDASIAFELEPMVHEQIGNSQANHSPTLNQVEELPMLTGIRTATEAIF >Mature_314_residues ARSTSSRSTTKVVATPLATASTNRTTTTLISEQAVELNTAATVESPIQPEASSSRVDALTPYFENFGPDPILGNHIENNN LEYLNDFINENQIDPTLGIDIRNEFVNNVMNSVDELQDLIMSQALGHTTGDYHMHTEEGDGYTRTTTVRPDGSVQGTETK NANGTSHYENDVVDQYKDKDGNIITKEEYDNLNKQEEKEEEPEKDESNDDNQSETEGNESEEPEGGEGDDITPESEARGR WYISEQIDELTGNLKEEMFVNSQFEIMDASIAFELEPMVHEQIGNSQANHSPTLNQVEELPMLTGIRTATEAIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35049; Mature: 34918
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSTSSRSTTKVVATPLATASTNRTTTTLISEQAVELNTAATVESPIQPEASSSRVDAL CCCCCCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHH TPYFENFGPDPILGNHIENNNLEYLNDFINENQIDPTLGIDIRNEFVNNVMNSVDELQDL CHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IMSQALGHTTGDYHMHTEEGDGYTRTTTVRPDGSVQGTETKNANGTSHYENDVVDQYKDK HHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DGNIITKEEYDNLNKQEEKEEEPEKDESNDDNQSETEGNESEEPEGGEGDDITPESEARG CCCEEEHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWYISEQIDELTGNLKEEMFVNSQFEIMDASIAFELEPMVHEQIGNSQANHSPTLNQVEE CEEHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECHHHHHHHCCCCCCCCCCHHHHHH LPMLTGIRTATEAIF HHHHHHHHHHHHHCC >Mature Secondary Structure ARSTSSRSTTKVVATPLATASTNRTTTTLISEQAVELNTAATVESPIQPEASSSRVDAL CCCCCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHH TPYFENFGPDPILGNHIENNNLEYLNDFINENQIDPTLGIDIRNEFVNNVMNSVDELQDL CHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IMSQALGHTTGDYHMHTEEGDGYTRTTTVRPDGSVQGTETKNANGTSHYENDVVDQYKDK HHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DGNIITKEEYDNLNKQEEKEEEPEKDESNDDNQSETEGNESEEPEGGEGDDITPESEARG CCCEEEHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RWYISEQIDELTGNLKEEMFVNSQFEIMDASIAFELEPMVHEQIGNSQANHSPTLNQVEE CEEHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECHHHHHHHCCCCCCCCCCHHHHHH LPMLTGIRTATEAIF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA