| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862577
Identifier: 33862577
GI number: 33862577
Start: 349847
End: 349996
Strand: Reverse
Name: 33862577
Synonym: PMT0304
Alternate gene names: NA
Gene position: 349996-349847 (Counterclockwise)
Preceding gene: 33862581
Following gene: 33862575
Centisome position: 14.52
GC content: 46.0
Gene sequence:
>150_bases ATGACATCGCTCTCTAAGTCGACGATTTACAAGATGATCGCCGAAAAGAAATTCCCAAGGCAAATCCAGATTGGACCTCA ACAGGTTGTTTGGACCAAGCATGACGTGCAGGACTGGATGAATCAGAAAATTCAGGAGGCAGCGCTTTGA
Upstream 100 bases:
>100_bases TGCTAAATTTAGCAATATGTGATACAATAAGAAGGAGGAATAGGATATCTATCTAATGACTTATGAAGTAAAATTTCTGC GATTGAATCAAGTAAAAGAG
Downstream 100 bases:
>100_bases GTTAACAAGGCGCCCTGCGCCCCTCTGAATCGTTCTTGGGCGATCTAAGCAACCTCAGGCGCCCATCCAACCTCCAGTTC CCTTCTCATGATCCATTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MTSLSKSTIYKMIAEKKFPRQIQIGPQQVVWTKHDVQDWMNQKIQEAAL
Sequences:
>Translated_49_residues MTSLSKSTIYKMIAEKKFPRQIQIGPQQVVWTKHDVQDWMNQKIQEAAL >Mature_48_residues TSLSKSTIYKMIAEKKFPRQIQIGPQQVVWTKHDVQDWMNQKIQEAAL
Specific function: Unknown
COG id: COG3311
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5775; Mature: 5644
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSKSTIYKMIAEKKFPRQIQIGPQQVVWTKHDVQDWMNQKIQEAAL CCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSLSKSTIYKMIAEKKFPRQIQIGPQQVVWTKHDVQDWMNQKIQEAAL CCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA