| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862572
Identifier: 33862572
GI number: 33862572
Start: 340808
End: 341341
Strand: Reverse
Name: 33862572
Synonym: PMT0299
Alternate gene names: NA
Gene position: 341341-340808 (Counterclockwise)
Preceding gene: 33862575
Following gene: 33862571
Centisome position: 14.16
GC content: 47.38
Gene sequence:
>534_bases ATGAACCTCCCGGCACTGGTTGGATCACTCCTACTCGTGACTGGAACTCAAGTGCCCCTACAGGTAAGGCAAGACCATGT ACTTCCTGTCTTTGGATGTGGGACAGGTTGCAGTGTTGAGACAGAGCAACTGACCTATCCAGAAACCATGGATGACGGGT GGATCAGGATCAAAGTCATCCAAAGAACTTGGATAAATTCCAAAGACGAGAATGGGGTCTATAGGACAAGACTATGTAGA GGTGATGAAGACGGATGTGGTCCTGCCGAATCTGAAATTTGGTTATTCGCAGATTGTGCTGGAGAGAAGTTTGCTACCAG TTCCAATGCCGACCGTTCCGACAGTTGGGAACAAGATGTCTTCTACAGAGAAGGGGACTGGAAAGGTCAACCAAAGTTTC AAACGGTTCATGGCAACCCCTTTATGAGATGGGCAAAGTTGTGTCCTGCAGAATCAGCAGAAGGCAGGGAGTACATACGC CAGTGGTATCAGAAGTTATTTGACTCCTTTAAGTCGATCAAAAACACCCCATGA
Upstream 100 bases:
>100_bases CCCTCCTAGGGGGTCTTGGAGGCGTTCCTCTCAGCAATGATCGCCAACCACTCAAAAACGCTCTTAGATGGTCCTATAGG CAGAAGGTCAGAGCACGACC
Downstream 100 bases:
>100_bases GATTTCTGCCTGCTCTTTTGCCACTTGCATGTCTCCTCCAACTACCAAAAGTGATAGGGCAAGACCTCCAGTGCCCTGGT CAAAACACTCTTGAGATGAG
Product: cation-dependent mannose-6-phosphate
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNLPALVGSLLLVTGTQVPLQVRQDHVLPVFGCGTGCSVETEQLTYPETMDDGWIRIKVIQRTWINSKDENGVYRTRLCR GDEDGCGPAESEIWLFADCAGEKFATSSNADRSDSWEQDVFYREGDWKGQPKFQTVHGNPFMRWAKLCPAESAEGREYIR QWYQKLFDSFKSIKNTP
Sequences:
>Translated_177_residues MNLPALVGSLLLVTGTQVPLQVRQDHVLPVFGCGTGCSVETEQLTYPETMDDGWIRIKVIQRTWINSKDENGVYRTRLCR GDEDGCGPAESEIWLFADCAGEKFATSSNADRSDSWEQDVFYREGDWKGQPKFQTVHGNPFMRWAKLCPAESAEGREYIR QWYQKLFDSFKSIKNTP >Mature_177_residues MNLPALVGSLLLVTGTQVPLQVRQDHVLPVFGCGTGCSVETEQLTYPETMDDGWIRIKVIQRTWINSKDENGVYRTRLCR GDEDGCGPAESEIWLFADCAGEKFATSSNADRSDSWEQDVFYREGDWKGQPKFQTVHGNPFMRWAKLCPAESAEGREYIR QWYQKLFDSFKSIKNTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20179; Mature: 20179
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPALVGSLLLVTGTQVPLQVRQDHVLPVFGCGTGCSVETEQLTYPETMDDGWIRIKVI CCCHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE QRTWINSKDENGVYRTRLCRGDEDGCGPAESEIWLFADCAGEKFATSSNADRSDSWEQDV EEHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FYREGDWKGQPKFQTVHGNPFMRWAKLCPAESAEGREYIRQWYQKLFDSFKSIKNTP EEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLPALVGSLLLVTGTQVPLQVRQDHVLPVFGCGTGCSVETEQLTYPETMDDGWIRIKVI CCCHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE QRTWINSKDENGVYRTRLCRGDEDGCGPAESEIWLFADCAGEKFATSSNADRSDSWEQDV EEHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FYREGDWKGQPKFQTVHGNPFMRWAKLCPAESAEGREYIRQWYQKLFDSFKSIKNTP EEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA