| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862552
Identifier: 33862552
GI number: 33862552
Start: 317135
End: 317461
Strand: Reverse
Name: 33862552
Synonym: PMT0279
Alternate gene names: NA
Gene position: 317461-317135 (Counterclockwise)
Preceding gene: 33862554
Following gene: 33862551
Centisome position: 13.17
GC content: 44.04
Gene sequence:
>327_bases TTGAAGCAAGTATTCCCCTTACTCCCCTTATTGATATGGACAGTACTTGTCCCATCCAAGGCAAATGAGTTCAAGTGCCC AGGAGACAACAACTATGAGCTTAGCTATTGCGCCTCCCAAGCCCTTAAACGATCAAATAGCCGTTTAGAGTCTCAACTAA AAGCTTCGACCTTTGAGGTCTGGAAGAGTGCGATCGGGGAGGTTTGCGCCGAAGCATATGCTGCATACAGTCAAGGTACG ATCTATCCATTAATGATCATGAGATGTGATGATAACTTAAACCAAACTCTTCTTGAAGAAATGAAGGAACTCGGTGAACG TCAATAG
Upstream 100 bases:
>100_bases AGGTTTCTTCAAGGAGATCATCGACAATTAAAGTCTGCCAATTCATTGACATTAATGCGTCAATGGCATGACATAATTCC CAAAAGCAACAGTCAAGGCA
Downstream 100 bases:
>100_bases AGAAAAGTAAAGCATAAAATTTTGCAGGGTATATATCACCCTCTTTGAGGTAGGATATAAAGCTCTATTCAACGATATTA GGGAGGTAGGAGGAGGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKQVFPLLPLLIWTVLVPSKANEFKCPGDNNYELSYCASQALKRSNSRLESQLKASTFEVWKSAIGEVCAEAYAAYSQGT IYPLMIMRCDDNLNQTLLEEMKELGERQ
Sequences:
>Translated_108_residues MKQVFPLLPLLIWTVLVPSKANEFKCPGDNNYELSYCASQALKRSNSRLESQLKASTFEVWKSAIGEVCAEAYAAYSQGT IYPLMIMRCDDNLNQTLLEEMKELGERQ >Mature_108_residues MKQVFPLLPLLIWTVLVPSKANEFKCPGDNNYELSYCASQALKRSNSRLESQLKASTFEVWKSAIGEVCAEAYAAYSQGT IYPLMIMRCDDNLNQTLLEEMKELGERQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12271; Mature: 12271
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVFPLLPLLIWTVLVPSKANEFKCPGDNNYELSYCASQALKRSNSRLESQLKASTFEV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKSAIGEVCAEAYAAYSQGTIYPLMIMRCDDNLNQTLLEEMKELGERQ HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKQVFPLLPLLIWTVLVPSKANEFKCPGDNNYELSYCASQALKRSNSRLESQLKASTFEV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKSAIGEVCAEAYAAYSQGTIYPLMIMRCDDNLNQTLLEEMKELGERQ HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA