| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yqjL [H]
Identifier: 33862504
GI number: 33862504
Start: 265520
End: 266365
Strand: Reverse
Name: yqjL [H]
Synonym: PMT0231
Alternate gene names: 33862504
Gene position: 266365-265520 (Counterclockwise)
Preceding gene: 33862505
Following gene: 33862500
Centisome position: 11.05
GC content: 35.82
Gene sequence:
>846_bases TTGCCGTTCCATGCTTTTGCTCAAGTTAATTTCACGGAAATCGATGGATCCATTTTACATTCCCAATATTACCCAATCCC TAATGCAAAATTCAAAGGCACTATTATTTTTCAAAATGGGGCAACAACGTCTCTAGAAGAATGGACTGAAAATAAAACCT TCTTTGAGTGTATTAAGCAACACGGCAATTTATTTATGTACGACAGAAGTGGTTTAGGGGAAAGCTCACCAGATTTCAGC ATCTCATTGAGAAGGCCCATAACAGCGCAGCTCGTTAATTCAAAATTAATTAGGTTGTTAAAAAGAAACCACATAAAATC GCCATATATTCTAGTTTCACACTCCTATGGTGGAATGCATGCAGGATATTTTGCACGCAAATACCCTGATTTAGTTGTTA GCATACTAATGGTCGATCCTGTGCCTAGCAATTATCAGTACTCAGATAAGTTTCGGAAGCAATTTGAATTCAATATTGCA AAAATGGAAAGAATGTCTAGCCGGGAAGCATATAAGTTATACAGTTTCTCAAGATCAAGCAAAGACAATAAGATGACAGC TGATTCATTTTATCAATTAAAGGGATTTGAAAAAACTATAGAGCAAGTCGCCAAACAGCCCAGCATGAGTAGCAAATTTC CAATCATAATAGCTTCTTCTACTTACATGGATAAAAAAGCTCCAATCAAAGGGAGTTGGTGTAATTTGCAAAAACATTGG TTAAATCAGAATCCTAATAGCATTATTTTTAGAGTTAATAGTGGTCACTTCATGCAGATCGATCGCCCCAAGCTGATTTG TGAACAACTTAATAAACTTGCAAAAATATCAACACAGTCTTCATAA
Upstream 100 bases:
>100_bases TTTTAGCCTGCCGCAGAATGAAGCAAGCTTTAAATTAAGACAACCGTAAAAGCCATGAAAAGCATGCTGCAAAAAAGTAA TAATTTTATCTTCATCTTGC
Downstream 100 bases:
>100_bases CCAAAACTGTAGATTTTTAAAAAAGACTTGAGGATTAAAACTGCTCAACACAGCCATAGCCATGCTGGCAACTGCTAAAC AACCAGCCTGATCAAAACCA
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPFHAFAQVNFTEIDGSILHSQYYPIPNAKFKGTIIFQNGATTSLEEWTENKTFFECIKQHGNLFMYDRSGLGESSPDFS ISLRRPITAQLVNSKLIRLLKRNHIKSPYILVSHSYGGMHAGYFARKYPDLVVSILMVDPVPSNYQYSDKFRKQFEFNIA KMERMSSREAYKLYSFSRSSKDNKMTADSFYQLKGFEKTIEQVAKQPSMSSKFPIIIASSTYMDKKAPIKGSWCNLQKHW LNQNPNSIIFRVNSGHFMQIDRPKLICEQLNKLAKISTQSS
Sequences:
>Translated_281_residues MPFHAFAQVNFTEIDGSILHSQYYPIPNAKFKGTIIFQNGATTSLEEWTENKTFFECIKQHGNLFMYDRSGLGESSPDFS ISLRRPITAQLVNSKLIRLLKRNHIKSPYILVSHSYGGMHAGYFARKYPDLVVSILMVDPVPSNYQYSDKFRKQFEFNIA KMERMSSREAYKLYSFSRSSKDNKMTADSFYQLKGFEKTIEQVAKQPSMSSKFPIIIASSTYMDKKAPIKGSWCNLQKHW LNQNPNSIIFRVNSGHFMQIDRPKLICEQLNKLAKISTQSS >Mature_280_residues PFHAFAQVNFTEIDGSILHSQYYPIPNAKFKGTIIFQNGATTSLEEWTENKTFFECIKQHGNLFMYDRSGLGESSPDFSI SLRRPITAQLVNSKLIRLLKRNHIKSPYILVSHSYGGMHAGYFARKYPDLVVSILMVDPVPSNYQYSDKFRKQFEFNIAK MERMSSREAYKLYSFSRSSKDNKMTADSFYQLKGFEKTIEQVAKQPSMSSKFPIIIASSTYMDKKAPIKGSWCNLQKHWL NQNPNSIIFRVNSGHFMQIDRPKLICEQLNKLAKISTQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 32410; Mature: 32278
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFHAFAQVNFTEIDGSILHSQYYPIPNAKFKGTIIFQNGATTSLEEWTENKTFFECIKQ CCCCEEEEEEEEECCCEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHH HGNLFMYDRSGLGESSPDFSISLRRPITAQLVNSKLIRLLKRNHIKSPYILVSHSYGGMH HCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC AGYFARKYPDLVVSILMVDPVPSNYQYSDKFRKQFEFNIAKMERMSSREAYKLYSFSRSS HHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC KDNKMTADSFYQLKGFEKTIEQVAKQPSMSSKFPIIIASSTYMDKKAPIKGSWCNLQKHW CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHCHHHHH LNQNPNSIIFRVNSGHFMQIDRPKLICEQLNKLAKISTQSS CCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PFHAFAQVNFTEIDGSILHSQYYPIPNAKFKGTIIFQNGATTSLEEWTENKTFFECIKQ CCCEEEEEEEEECCCEEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHH HGNLFMYDRSGLGESSPDFSISLRRPITAQLVNSKLIRLLKRNHIKSPYILVSHSYGGMH HCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC AGYFARKYPDLVVSILMVDPVPSNYQYSDKFRKQFEFNIAKMERMSSREAYKLYSFSRSS HHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC KDNKMTADSFYQLKGFEKTIEQVAKQPSMSSKFPIIIASSTYMDKKAPIKGSWCNLQKHW CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHCHHHHH LNQNPNSIIFRVNSGHFMQIDRPKLICEQLNKLAKISTQSS CCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]