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The map label for this gene is recO [H]

Identifier: 33862484

GI number: 33862484

Start: 242124

End: 242927

Strand: Reverse

Name: recO [H]

Synonym: PMT0211

Alternate gene names: 33862484

Gene position: 242927-242124 (Counterclockwise)

Preceding gene: 33862485

Following gene: 33862483

Centisome position: 10.08

GC content: 60.7

Gene sequence:

>804_bases
GTGAGTGGAGAACGACGCCTCAACGGCCTCTCTTTGAAGGTGGGACCGCTCGGGGAACATGATCGACTTCTCACTCTGCT
CAGCGATCAAGAAGGAGTGACCCGTCTTGCCGTACCTGGGGCGCGACGACCACGCAGCAGCCTTGCGGCAGCAGTGCCAC
TCAGCTTGCTGGAGCTGCAAGTCGCAGGACGCCGAGGTCTAGCAAGGGTGCGGCAACTCAAGGTATTGCGCAGCTTTAAC
AGTGTGGGGAAGCAGCTAGAGACACTGGCAGCTGCCCAGGCCCTTGCAGAACTCAGCCTGATGTTGGTAGCAGGCAACGA
TCCTCTACCTGGACTGCTCAACACACTGCTGATGCATCTCGAACGACTCGAGGCCCTCAGCCAAGCCCAGCCAGCGCAGC
CAAACACAACCCTGGCCTGCAGCGTGCAGGCGTGCGTGCATTTGCTTGCTCTAGGCGGCTATGGCCTACCAGTACAGGAA
TGCTGTCGCAACGGCACAGCGCTGGAGCCACCCCTGGGCCAATGGGAATGGCGCTGCAGTTTGATGCCAGAAGAGGGTTT
TGCAATCGGCGCCCTACCCGGCGCAGCACTGCAACTGAATCCCTCAGAGCTAGCCCTATTGCAGCGGCTGCTTCGCCCTG
ACCTGCCCATGCGACGCGATGGAGAGCTGATGGGTCCGCCAGAGGTGTGGCTGCGCTTGCTCGCGGTAGTGGAGTGCTGG
ACCCGCACCCATCTGCCACATCATATGCGAGCTCTAGGGATGTTGCGCAAGGCCATCATCAGCTCAGGCGATGGGCGAAC
ATAA

Upstream 100 bases:

>100_bases
ACACTCTCGATCAAGCCCTCGACATGGTGGAAGCAGGCGCAACCCGTCTTGGCACCAGCCAAGGCCCAGCTCTCATGCAG
GCACTACGCCGTGGCCAAAC

Downstream 100 bases:

>100_bases
CCGCGGCACCACAAGCATCTTGAGCGGTCCAACTCTAAACAGCCCCGAACCGGCCCTCCCAACCGGCTCGAATCCAGAAG
GACGCCGCGGATTGGCAGCG

Product: recombination protein O

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSGERRLNGLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQVAGRRGLARVRQLKVLRSFN
SVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHLERLEALSQAQPAQPNTTLACSVQACVHLLALGGYGLPVQE
CCRNGTALEPPLGQWEWRCSLMPEEGFAIGALPGAALQLNPSELALLQRLLRPDLPMRRDGELMGPPEVWLRLLAVVECW
TRTHLPHHMRALGMLRKAIISSGDGRT

Sequences:

>Translated_267_residues
MSGERRLNGLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQVAGRRGLARVRQLKVLRSFN
SVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHLERLEALSQAQPAQPNTTLACSVQACVHLLALGGYGLPVQE
CCRNGTALEPPLGQWEWRCSLMPEEGFAIGALPGAALQLNPSELALLQRLLRPDLPMRRDGELMGPPEVWLRLLAVVECW
TRTHLPHHMRALGMLRKAIISSGDGRT
>Mature_266_residues
SGERRLNGLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQVAGRRGLARVRQLKVLRSFNS
VGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHLERLEALSQAQPAQPNTTLACSVQACVHLLALGGYGLPVQEC
CRNGTALEPPLGQWEWRCSLMPEEGFAIGALPGAALQLNPSELALLQRLLRPDLPMRRDGELMGPPEVWLRLLAVVECWT
RTHLPHHMRALGMLRKAIISSGDGRT

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28895; Mature: 28764

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGERRLNGLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQ
CCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
VAGRRGLARVRQLKVLRSFNSVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
ERLEALSQAQPAQPNTTLACSVQACVHLLALGGYGLPVQECCRNGTALEPPLGQWEWRCS
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEE
LMPEEGFAIGALPGAALQLNPSELALLQRLLRPDLPMRRDGELMGPPEVWLRLLAVVECW
ECCCCCCEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TRTHLPHHMRALGMLRKAIISSGDGRT
HHCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGERRLNGLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQ
CCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
VAGRRGLARVRQLKVLRSFNSVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
ERLEALSQAQPAQPNTTLACSVQACVHLLALGGYGLPVQECCRNGTALEPPLGQWEWRCS
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEE
LMPEEGFAIGALPGAALQLNPSELALLQRLLRPDLPMRRDGELMGPPEVWLRLLAVVECW
ECCCCCCEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TRTHLPHHMRALGMLRKAIISSGDGRT
HHCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA