| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862425
Identifier: 33862425
GI number: 33862425
Start: 169715
End: 170896
Strand: Reverse
Name: 33862425
Synonym: PMT0152
Alternate gene names: NA
Gene position: 170896-169715 (Counterclockwise)
Preceding gene: 33862428
Following gene: 33862424
Centisome position: 7.09
GC content: 57.11
Gene sequence:
>1182_bases ATGCTGAACCTGCTCTTGGCAGTGCGTCAACGAAGTGAATCGCTGGTTGCACCCCTCGAACCGGAAGATCTCTGCCTTCA GGGCATGGCCGATGCAAGTCCGCCGAAATGGCACCTTGCTCACACCACCTGGTTCTTCGATACCTTTTTGCTTCAGCCCT ATCTCAAAGGCTACGAAGGCTGTGATCCACGCTGGAGTTATCAATTCAACTCCTATTACGAAGCGGCCGGGGCACGCCAT CCAAGACCCTCACGGGGTGTCCTGACCCGGCCGACAATCAGGGAGGTCTTGGCGTGGCGGCAACAGGTGGACGCTGCATT AACGCAACTCCTGACCTCCCCGGACGCTGACCAAGAAGACATCCAGCAACTGGCAGAACTGGGTCTACATCACGAACAGC AGCATCAGGAATTGCTGTTGATGGATCTCTTGGATGGCTTTAGCCGACAACCGTTAGAGCCTGCTTATCAAACTGGCGCC GATCATCATCTGGGACCTTTAGAGCCAACCCAAGCCCGCTGGATCTCCTGCGATGGAGGTCTCTATGAAATCGGCCATGC TGGCGCGGGATTCCATTTTGACAACGAGGGGCCGTCGCATCGCATCTGGCTGGAGGACTTTGCCCTGATGGATCATTTGG TGTGCAACGACGACTTCAGGTGCTTTATCGCAGATGGGGGGTATCAGCGCCCAGAACTTTGGATGAGTGAGGGCTGGGCC GTACAACAACAACTGGGATGGCAGGCTCCCCGGTACTGGCGCGGCAACGGGCCTGCAGATCAATGGCAGGAAGAATTCAC CCTGGAAGGAAGGCGGCACTTGAATCGAAAAGCACCGGTGCGCCATTTGAGCTGGTTCGAAGCCGATGCCTACGCACGGT GGTGTGGTGCTCGATTGCCCAGCGAAGCGGAATGGGAAGTGGCCCTACAACAGCATCAACCTCTGATCCACGATGCTCAC GGCAAGCTGTGGCAATGGACGGCAAGTCCTTATAGGCCCTATCCGGGATTCCTTCCGGCCCCAGGCGCTGTGGGTGAATA CAACGGAAAATTCATGAGCTCCCAGTTTGTTCTTCGCGGCAGCAGCTGGCTCACACCGGAAGGCCATGAGCGCGACACCT ACCGGAACTTCTTTGCACCAGCAAACCGTTGGATGGCAGCAGGACTGCGCCTGGCCCGATGA
Upstream 100 bases:
>100_bases CCTATCAGTGCCCTTCGGTGACCAAGAGCTTTTCTATGACCAGATCCATTCGGCCGTGGTGCTTGGGCGCACAAGTGGGG ATCAGTAAAACCGTTTCCTC
Downstream 100 bases:
>100_bases GCATCGAGCTGATTGACCTACATCCCGCCCCTGCGGATCTGAAGCAGCTGGTGCAGTCAGGCTTCAAATGCCAGCCGCGG CAACTGCCAGCTTGGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWSYQFNSYYEAAGARH PRPSRGVLTRPTIREVLAWRQQVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYQTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEDFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWA VQQQLGWQAPRYWRGNGPADQWQEEFTLEGRRHLNRKAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHERDTYRNFFAPANRWMAAGLRLAR
Sequences:
>Translated_393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWSYQFNSYYEAAGARH PRPSRGVLTRPTIREVLAWRQQVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYQTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEDFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWA VQQQLGWQAPRYWRGNGPADQWQEEFTLEGRRHLNRKAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHERDTYRNFFAPANRWMAAGLRLAR >Mature_393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWSYQFNSYYEAAGARH PRPSRGVLTRPTIREVLAWRQQVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYQTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEDFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWA VQQQLGWQAPRYWRGNGPADQWQEEFTLEGRRHLNRKAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHERDTYRNFFAPANRWMAAGLRLAR
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45195; Mature: 45195
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEG CCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC CDPRWSYQFNSYYEAAGARHPRPSRGVLTRPTIREVLAWRQQVDAALTQLLTSPDADQED CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYQTGADHHLGPLEPTQARWISCDGG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCC LYEIGHAGAGFHFDNEGPSHRIWLEDFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWA EEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCH VQQQLGWQAPRYWRGNGPADQWQEEFTLEGRRHLNRKAPVRHLSWFEADAYARWCGARLP HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC SEAEWEVALQQHQPLIHDAHGKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRG CCCHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEC SSWLTPEGHERDTYRNFFAPANRWMAAGLRLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEG CCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC CDPRWSYQFNSYYEAAGARHPRPSRGVLTRPTIREVLAWRQQVDAALTQLLTSPDADQED CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYQTGADHHLGPLEPTQARWISCDGG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCC LYEIGHAGAGFHFDNEGPSHRIWLEDFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWA EEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCH VQQQLGWQAPRYWRGNGPADQWQEEFTLEGRRHLNRKAPVRHLSWFEADAYARWCGARLP HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC SEAEWEVALQQHQPLIHDAHGKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRG CCCHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEC SSWLTPEGHERDTYRNFFAPANRWMAAGLRLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA