Click here to switch to the map view.

The map label for this gene is yupB [H]

Identifier: 335055520

GI number: 335055520

Start: 1367383

End: 1368390

Strand: Direct

Name: yupB [H]

Synonym: NA

Alternate gene names: 335055520

Gene position: 1367383-1368390 (Clockwise)

Preceding gene: 94310188

Following gene: 94310190

Centisome position: 34.81

GC content: 64.68

Gene sequence:

>1008_bases
TTGACGGCCCCCGTCCGCGCGCTCCTGACCGTCGCGGGCGATGAACTCAGGAAAGACGGTGGCAACAGGGCCAACCGGGT
TCCTCGTGCCGACCGCACCGAACAGCCAAAAGGCTGGGCTTCCGAATCTAGGAATCCGGTGTGCGGTGTGAACAGCAAAC
CTCTTTTTGTCAGGAGAAAGACCATGCAACTCGCATCCCGTTTCGCTTCCCGCTCCCCGGCACTGCGCAGCGATTACCCA
CTGTCCGATGACCAAATCCGCAGGGTGGCCCCGTCCATCTTCGCCGACGCCCCGCACGAAAGCCGTTCCGAGCGATACAG
CTACATCCCCACCGCGACCGTCCTGCAAGAACTGCGCGGAGAAGGTTTCGAGCCTTTCATGGTGACGCAAACCCGCGTGC
GCCACGACGACCGCCGCGACTACACCAAGCACATGATCCGGCTGCGCCACGCCAGCCAGATCAACGGCCGCGAGGCCAAC
GAAATCATCCTGCTGAACTCCCATGACGGCACCAGCAGCTATCAGATGCTGGCCGGGATGTTCCGCTTCGTTTGCAGCAA
TGGCCTTGTCTGCGGCGACACCGTGGCCGACGTGCGCGTGCCGCACAAGGGCGACGTAGCCGGGCACGTCATCGAAGGCG
CTTACGAAGTCCTGCACGGCTTCGACCGGGTGCAGGAATCGCGCGATGCCATGCGCGCCATCACGCTCGACGCCGGGGAA
TCGGAAGTGTTCGCCCGCGCTGCGCTGGCGTTGAAGTACGACGAGGACAAGCCAGCGCCCATCACGGAATCGCAAATCCT
GATGCCGCGCCGCCATGACGACGACCGCCGCGACCTGTGGAGCGTGTTCAACCGCACGCAGGAGAACTTGACCAAAGGCG
GCCTGTCCGCCCGCGCCGCGAATGGCCGCCGCCAGACCACCCGGCCCGTGCAGGGCATCGACCAAAGCGTGCGCCTGAAT
CGCGCCCTGTGGCTGCTGGCCGATGGCCTGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: F plasmid protein 32-like protein (CMGI-2)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:
NA

Sequences:

>Translated_335_residues
MTAPVRALLTVAGDELRKDGGNRANRVPRADRTEQPKGWASESRNPVCGVNSKPLFVRRKTMQLASRFASRSPALRSDYP
LSDDQIRRVAPSIFADAPHESRSERYSYIPTATVLQELRGEGFEPFMVTQTRVRHDDRRDYTKHMIRLRHASQINGREAN
EIILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFDRVQESRDAMRAITLDAGE
SEVFARAALALKYDEDKPAPITESQILMPRRHDDDRRDLWSVFNRTQENLTKGGLSARAANGRRQTTRPVQGIDQSVRLN
RALWLLADGLRQLKA
>Mature_334_residues
TAPVRALLTVAGDELRKDGGNRANRVPRADRTEQPKGWASESRNPVCGVNSKPLFVRRKTMQLASRFASRSPALRSDYPL
SDDQIRRVAPSIFADAPHESRSERYSYIPTATVLQELRGEGFEPFMVTQTRVRHDDRRDYTKHMIRLRHASQINGREANE
IILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFDRVQESRDAMRAITLDAGES
EVFARAALALKYDEDKPAPITESQILMPRRHDDDRRDLWSVFNRTQENLTKGGLSARAANGRRQTTRPVQGIDQSVRLNR
ALWLLADGLRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=267, Percent_Identity=58.0524344569288, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI87081705, Length=267, Percent_Identity=58.0524344569288, Blast_Score=308, Evalue=4e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 37673; Mature: 37542

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVRALLTVAGDELRKDGGNRANRVPRADRTEQPKGWASESRNPVCGVNSKPLFVRRK
CCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEHHH
TMQLASRFASRSPALRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTATVLQELRG
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHC
EGFEPFMVTQTRVRHDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGM
CCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH
FRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFDRVQESRDAMRAITLDAGE
HHHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
SEVFARAALALKYDEDKPAPITESQILMPRRHDDDRRDLWSVFNRTQENLTKGGLSARAA
HHHHHHHHHHEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCC
NGRRQTTRPVQGIDQSVRLNRALWLLADGLRQLKA
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAPVRALLTVAGDELRKDGGNRANRVPRADRTEQPKGWASESRNPVCGVNSKPLFVRRK
CCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEHHH
TMQLASRFASRSPALRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTATVLQELRG
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHC
EGFEPFMVTQTRVRHDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGM
CCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH
FRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFDRVQESRDAMRAITLDAGE
HHHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
SEVFARAALALKYDEDKPAPITESQILMPRRHDDDRRDLWSVFNRTQENLTKGGLSARAA
HHHHHHHHHHEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCC
NGRRQTTRPVQGIDQSVRLNRALWLLADGLRQLKA
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]