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The map label for this gene is 33359542

Identifier: 33359542

GI number: 33359542

Start: 1066016

End: 1066282

Strand: Direct

Name: 33359542

Synonym: PF1117

Alternate gene names: NA

Gene position: 1066016-1066282 (Clockwise)

Preceding gene: 18977488

Following gene: 18977506

Centisome position: 55.86

GC content: 36.33

Gene sequence:

>267_bases
GTGTTTCACATGTACATTGTAGTTGTCTACGATGTGGGAGTTGAGAGAGTAAACAAAGTGAAGAAGTTCCTTAGAATGCA
TCTTAATTGGGTTCAAAACAGTGTCTTTGAGGGCGAAGTTACACTTGCGGAGTTCGAGAGAATAAAAGAGGGGCTCAAGA
AGATTATAGATGAAAATAGTGATTCTGTAATAATTTATAAACTTCGCTCCATGCCACCAAGAGAAACTTTAGGAATCGAA
AAGAATCCAATAGAGGAAATAATTTAA

Upstream 100 bases:

>100_bases
AAACCCTAATCCCTCAAAAACCTTTATTTTCAATTTTCTAACTTTTTCATAGATATTTTTGGGAAAAAAGTTAAATTAGC
GTGTATCGAAAAATTTTTGG

Downstream 100 bases:

>100_bases
AACCACGCGACAAGGGGGCTGTACTCCTCAACCCCCACTAAATGTTTTATTATCTTATAAGCTTCAAGCCGTATTAATCT
CCGCCTCGTAACTCCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MFHMYIVVVYDVGVERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENSDSVIIYKLRSMPPRETLGIE
KNPIEEII

Sequences:

>Translated_88_residues
MFHMYIVVVYDVGVERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENSDSVIIYKLRSMPPRETLGIE
KNPIEEII
>Mature_88_residues
MFHMYIVVVYDVGVERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENSDSVIIYKLRSMPPRETLGIE
KNPIEEII

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021127
- InterPro:   IPR000640
- InterPro:   IPR019199 [H]

Pfam domain/function: PF09827 CRISPR_Cas2 [H]

EC number: NA

Molecular weight: Translated: 10394; Mature: 10394

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHMYIVVVYDVGVERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENS
CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
DSVIIYKLRSMPPRETLGIEKNPIEEII
CCEEEEEECCCCCHHHCCCCCCCHHHCC
>Mature Secondary Structure
MFHMYIVVVYDVGVERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENS
CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
DSVIIYKLRSMPPRETLGIEKNPIEEII
CCEEEEEECCCCCHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]