| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 326424095
Identifier: 326424095
GI number: 326424095
Start: 2969165
End: 2970550
Strand: Reverse
Name: 326424095
Synonym: NA
Alternate gene names: NA
Gene position: 2970550-2969165 (Counterclockwise)
Preceding gene: 27366181
Following gene: 27366178
Centisome position: 90.51
GC content: 45.24
Gene sequence:
>1386_bases ATGAATAAAATGAAGTTGGCACTGGCGGCATCAATGATGCTCTCCATTGTGGGTTGTCAGTCTACGCCAGAAGAAAAACT CACCCAAGAGGTGACAAACGAAGTCGCTGAAAATGCGAGCACGCCGTTTGTTGGCATTCAACAATCGCATCAACAATGGT CTCAAGCTCTACAAGACAGCGGGAAGCTGGCGATCTACGCACCGGAAAACTTCAAAGATTTAACATCGGCTTGGAAAGAA GCCAGTGAGATCTACACAAAACTGGAAAAAGATCCTTCTCTAGCATCGAAAAGCTACTCTCTATTTTCTTCTGACACCTA TGCGCAAGCGTATCAAGAGCAAATTAAGTTAGTGGATCAAAATTTCGCAGCGTTAGAAAAACTGAAAGCGAAAGCGGACG TGATCCTGGCAGATTCTATTGCTCAGATGGATTACCTAGCAGAGATCAATGCTGCGAAACTCTACGCGAATGATTACAAC AAGGTGCTTTCTCAGTATAAGAAGCTATTTTCTTACGTTGTGGTTGATGAGCTAGAAGAAGCGCAAGAGAAACAAGTTGT TTTCCTCAATACCGCGAAACAGCTTGAGGTGAAGGTAGTGCACAAAACGTTTATTCTACCGCTTCAACAAGAGCTGAAAA CCCTAAAGAAAGAAGATTTTAATGAAGTTGCGCCAGTGAGTTTTGCCACGGCGGAAAACGTTATTAATATTGCAGCAAAC ATTGCTCAAACCAATCCTCGTGATAAAGCCGCAATTGAGTTGGCAGTGGCGAACGCTCAGTTTGAGATCGAACACGTTAA GCAAGTCACGCATCAGGTGAAACTGTTGGCTTCTGTCGAAGACGATGCTTTTGAAAACTCAGTTTTAGAAATTGAAAACA AGTTGCTCGCCATCTCTAAAGCAGTCGATGGTTCTGATTACCGTGATGTGATGCTAAGAGAGCAAAGCGAGAAGATTCTT GCAAGCGTGAAACGCATGCACGAAGCAAACAAAACCACCGATTTGTCTCAGCAGGTGACAGAGCTTAACAGTAAAGTGAA AGTGCTCGAAACCAAGTCGGCTGAGCAAAAAACAGCATTGGAAAAAGCCAATCAACGTGAGCTGGCGTTAAATGCCCACA TTGAACGCGAAGCTGCGCATATCAAGAGTTTGGAAGAGTTGGTCGCGAATCTGAAACTTCAGTTAGCGGCAAAAGATCAG CCTGCGTCTACTGTGGAACAGGCAGATCCAGTGCAAGAGGGGACAGCATTAGAAGAGCAAGCTCCTCAAGTAGAAGAGGC AGCCCCTAAAGCCGAAGCGATTGAAACTGAAGAAGCAGCAAGCGACGTTGAGGCGAGTAGCGAAACCGCAGCGCCAGAAA CGCAGCCAGAGAATGCAGCAGAATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: DNA repair ATPase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
NA
Sequences:
>Translated_461_residues MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDSGKLAIYAPENFKDLTSAWKE ASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQNFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYN KVLSQYKKLFSYVVVDELEEAQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISKAVDGSDYRDVMLREQSEKIL ASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTALEKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQ PASTVEQADPVQEGTALEEQAPQVEEAAPKAEAIETEEAASDVEASSETAAPETQPENAAE >Mature_461_residues MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDSGKLAIYAPENFKDLTSAWKE ASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQNFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYN KVLSQYKKLFSYVVVDELEEAQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISKAVDGSDYRDVMLREQSEKIL ASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTALEKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQ PASTVEQADPVQEGTALEEQAPQVEEAAPKAEAIETEEAASDVEASSETAAPETQPENAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50940; Mature: 50940
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCC GKLAIYAPENFKDLTSAWKEASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQ CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHH NFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYNKVLSQYKKLFSYVVVDELEE HHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISK HHCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH AVDGSDYRDVMLREQSEKILASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH EKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQPASTVEQADPVQEGTALEEQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCHHHH APQVEEAAPKAEAIETEEAASDVEASSETAAPETQPENAAE CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCC GKLAIYAPENFKDLTSAWKEASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQ CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHH NFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYNKVLSQYKKLFSYVVVDELEE HHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISK HHCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH AVDGSDYRDVMLREQSEKILASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH EKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQPASTVEQADPVQEGTALEEQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCHHHH APQVEEAAPKAEAIETEEAASDVEASSETAAPETQPENAAE CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA