| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is torA [H]
Identifier: 326424094
GI number: 326424094
Start: 2962329
End: 2964791
Strand: Reverse
Name: torA [H]
Synonym: NA
Alternate gene names: 326424094
Gene position: 2964791-2962329 (Counterclockwise)
Preceding gene: 27366175
Following gene: 27366173
Centisome position: 90.34
GC content: 49.37
Gene sequence:
>2463_bases ATGGCTATTACAAGAAGAAGTTTTCTTAAGGGCGTAGCAACCACAAGTGCTGCCTCTGTTATCGGTCCTAGCTTATTGGC GTCGGCTTCTGCAAACGCAGTAGAAACAACAGGAACTTGGAAAGTATCTGGTTCTCACTGGGGCGCGTTCCGCGCCCACA TCTACGCGGGTAAAGTTCAAGAGATCAAACCGATAGAGCTAGACCAAAACCCAACTGAGATGCTAAACGGCATCAAAGGC ATCATCTACAGCCCTTCACGTGTGCGTTACCCAATGGTGCGCCTTGACTGGCTGAAAAAACACAAGTACAGCGCAGATAC GCGCGGTAACAACCGTTTTGTACGTGTGACTTGGGATGAAGCGCTGGATCTGTTCTACCGTGAGCTAGAGCGCGTACAAA AAGAGTACGGCCCTTGGGCGCTACACGCAGGCCAAACAGGTTGGAACCAAACCGGTTCATTCAACAACTGTACTGCACAT ATGCAGCGCGCTGTTGGCATGCACGGTAACTACATCACCAAAGTGGGTGATTACTCAACCGGTGCTGGTCAAACGATTCT GCCATACGTGCTAGGTTCTACAGAAGTATACGCACAAGGCACGTCTTGGTCTGAGATTCTAGAAAACGCAGACAACATTA TTCTTTGGGCGAACGACCCAGTGAAAAACCTGCAAGTGGGTTGGAACTGTGAAACGCATGAATCTTACGCTTACCTTGCG CAACTAAAAGAGAAAGTGGCCAAAGGCGAGATCAACGTGATTTCGGTTGACCCGGTTAAGAACAAAACACAGCGTTACTT AGAGAACGATCATCTGTATGTCAACCCAATGACAGATGTACCGTTTATGTTGGCGATTGCACACGTTCTCTACACTGAAA ACCTATACGATAAGAAGTTCATCGAAACTTACTGTCTTGGCTTTGAAGAGTTCATCAACTACGTTCAAGGCAAAACTAAG GACAAAGTTGAGAAAACACCAGAATGGGCTGCGCCTATTTGTGGCGTGAAAGCGGACAAAATCCGTGAATTTGCCCGCAT GCTTGTGAAAGGTCGCACTCAGATCCTGATGGGTTGGTGTATCCAACGTCAAGAGCACGGTGAACAGCCTTACTGGGCAG CAGCGGTTGTTGCGGCAATGATTGGTCAAATCGGCTTGCCTGGCGGTGGTATCTCTTATGGTCACCACTACTCAAGTATC GGTGTGCCTTCAACCGGTTTTGCTGGCCCTGGTGGTTTCCCTCGTAACCTTGATGCAGGCATGAAACCTAAGTGGGACAA CAATGACTTCAATGGTTACAGCCGTACTATCCCTGTTGCGCGTTGGATCGACTGTCTGCTAGAGCCAGGCAAAGAGATCA ACTACAACGGTGGCAAAGTGAAGCTGCCAGACTTCAAGATGATGGTCATTTCGGGGTGTAACCCATGGCACCACCATCAA GATCGCAACCGCATGAAGCAAGCGTTCCAGAAACTACAAACTGTTGTGACGATCGACTTCGCGTGGACAGCGACGTGTCG CTTCTCAGACATCGTGCTACCAGCATGTACCCAGTGGGAACGCAATGACATCGACGTATACGGTTCATACTCAAGCCGTG GTTTGATTGCGATGCACCGTTTGGTGGATCCACTGTTCCAATCTAAGCCAGACTTCCAAATCATGAAGGAATTGACTGAG CGCTTTGGCCGCAGTGAAGAATACTCTCGCGGTATGAGTGAAATGGATTGGATTCGCAGCCTATACAACGATTGTAAGAA ATCGAACGAAGGCAAGTTCGAGATGCCAGAGTTTGATGAGTTCTGGGAGAAGAGCGTACTGGACTTCGGCCAAGGTCAAC CTTGGGTTCGTCACGCGGACTTCCGTCAAGACCCTGAAATCAACCCACTGGGTACACCTTCAGGCTTTATCGAGATCACG TCTCGTAAGATCGGTCGTTACGGTTACGAACACTGCCAAGAGCACCCAATGTGGTTCGAGAAATCAGAACGTTCACACGG CGGACCAGGTTCAGACAAACATCCGTTCTGGTTGCAATCTTGTCACCCAGACAAACGCCTGCACTCTCAGATGTGTGAGT CTGAAGAGTTCCGTGCGACTTACGCAGTAAAAGGTCGTGAGCCAGTCTACATCAACCCACTTGATGCAAAAGCAAAAGGC ATCAAAGAGGGTGATTTGGTACGCGTGTTTAATGACCGTGGTCAGCTTCTTGCTGGTGCTGTGCTAACGGACAGCTACCC ACGTGGCGTGATTCGTATCGAAGAAGGCGCGTGGTACGGTCCTCTAAACGAGAAAGTGGGCGCAATCGACACATATGGTG ATCCAAACACACTGACTCAAGACATCGGCTCTTCTGAGTTGGCACAGGCAACTTCTGCGAACACCTGTATCGTAGACTTC GAGAAGTTCACTGGTAAAGTTCCACCAGTCACCTCATTTGGTGGTCCAATCGAAGTCGCGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: trimethylamine-N-oxide reductase TorA
Products: NA
Alternate protein names: TMAO reductase; Trimethylamine oxidase [H]
Number of amino acids: Translated: 820; Mature: 819
Protein sequence:
NA
Sequences:
>Translated_820_residues MAITRRSFLKGVATTSAASVIGPSLLASASANAVETTGTWKVSGSHWGAFRAHIYAGKVQEIKPIELDQNPTEMLNGIKG IIYSPSRVRYPMVRLDWLKKHKYSADTRGNNRFVRVTWDEALDLFYRELERVQKEYGPWALHAGQTGWNQTGSFNNCTAH MQRAVGMHGNYITKVGDYSTGAGQTILPYVLGSTEVYAQGTSWSEILENADNIILWANDPVKNLQVGWNCETHESYAYLA QLKEKVAKGEINVISVDPVKNKTQRYLENDHLYVNPMTDVPFMLAIAHVLYTENLYDKKFIETYCLGFEEFINYVQGKTK DKVEKTPEWAAPICGVKADKIREFARMLVKGRTQILMGWCIQRQEHGEQPYWAAAVVAAMIGQIGLPGGGISYGHHYSSI GVPSTGFAGPGGFPRNLDAGMKPKWDNNDFNGYSRTIPVARWIDCLLEPGKEINYNGGKVKLPDFKMMVISGCNPWHHHQ DRNRMKQAFQKLQTVVTIDFAWTATCRFSDIVLPACTQWERNDIDVYGSYSSRGLIAMHRLVDPLFQSKPDFQIMKELTE RFGRSEEYSRGMSEMDWIRSLYNDCKKSNEGKFEMPEFDEFWEKSVLDFGQGQPWVRHADFRQDPEINPLGTPSGFIEIT SRKIGRYGYEHCQEHPMWFEKSERSHGGPGSDKHPFWLQSCHPDKRLHSQMCESEEFRATYAVKGREPVYINPLDAKAKG IKEGDLVRVFNDRGQLLAGAVLTDSYPRGVIRIEEGAWYGPLNEKVGAIDTYGDPNTLTQDIGSSELAQATSANTCIVDF EKFTGKVPPVTSFGGPIEVA >Mature_819_residues AITRRSFLKGVATTSAASVIGPSLLASASANAVETTGTWKVSGSHWGAFRAHIYAGKVQEIKPIELDQNPTEMLNGIKGI IYSPSRVRYPMVRLDWLKKHKYSADTRGNNRFVRVTWDEALDLFYRELERVQKEYGPWALHAGQTGWNQTGSFNNCTAHM QRAVGMHGNYITKVGDYSTGAGQTILPYVLGSTEVYAQGTSWSEILENADNIILWANDPVKNLQVGWNCETHESYAYLAQ LKEKVAKGEINVISVDPVKNKTQRYLENDHLYVNPMTDVPFMLAIAHVLYTENLYDKKFIETYCLGFEEFINYVQGKTKD KVEKTPEWAAPICGVKADKIREFARMLVKGRTQILMGWCIQRQEHGEQPYWAAAVVAAMIGQIGLPGGGISYGHHYSSIG VPSTGFAGPGGFPRNLDAGMKPKWDNNDFNGYSRTIPVARWIDCLLEPGKEINYNGGKVKLPDFKMMVISGCNPWHHHQD RNRMKQAFQKLQTVVTIDFAWTATCRFSDIVLPACTQWERNDIDVYGSYSSRGLIAMHRLVDPLFQSKPDFQIMKELTER FGRSEEYSRGMSEMDWIRSLYNDCKKSNEGKFEMPEFDEFWEKSVLDFGQGQPWVRHADFRQDPEINPLGTPSGFIEITS RKIGRYGYEHCQEHPMWFEKSERSHGGPGSDKHPFWLQSCHPDKRLHSQMCESEEFRATYAVKGREPVYINPLDAKAKGI KEGDLVRVFNDRGQLLAGAVLTDSYPRGVIRIEEGAWYGPLNEKVGAIDTYGDPNTLTQDIGSSELAQATSANTCIVDFE KFTGKVPPVTSFGGPIEVA
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787231, Length=835, Percent_Identity=51.7365269461078, Blast_Score=873, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=825, Percent_Identity=36.7272727272727, Blast_Score=557, Evalue=1e-160, Organism=Escherichia coli, GI145693196, Length=790, Percent_Identity=37.3417721518987, Blast_Score=535, Evalue=1e-153, Organism=Escherichia coli, GI87081797, Length=865, Percent_Identity=29.364161849711, Blast_Score=295, Evalue=1e-80, Organism=Escherichia coli, GI1787870, Length=863, Percent_Identity=28.1575898030127, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI171474008, Length=854, Percent_Identity=27.751756440281, Blast_Score=261, Evalue=1e-70, Organism=Escherichia coli, GI3868721, Length=695, Percent_Identity=23.4532374100719, Blast_Score=136, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 - InterPro: IPR011887 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 92509; Mature: 92377
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITRRSFLKGVATTSAASVIGPSLLASASANAVETTGTWKVSGSHWGAFRAHIYAGKVQ CCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEECCCEEEECCCCCCCEEEEEEECCCC EIKPIELDQNPTEMLNGIKGIIYSPSRVRYPMVRLDWLKKHKYSADTRGNNRFVRVTWDE CCCCCCCCCCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHH ALDLFYRELERVQKEYGPWALHAGQTGWNQTGSFNNCTAHMQRAVGMHGNYITKVGDYST HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC GAGQTILPYVLGSTEVYAQGTSWSEILENADNIILWANDPVKNLQVGWNCETHESYAYLA CCCCEEHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHH QLKEKVAKGEINVISVDPVKNKTQRYLENDHLYVNPMTDVPFMLAIAHVLYTENLYDKKF HHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHH IETYCLGFEEFINYVQGKTKDKVEKTPEWAAPICGVKADKIREFARMLVKGRTQILMGWC HHHHHCCHHHHHHHHCCCCHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH IQRQEHGEQPYWAAAVVAAMIGQIGLPGGGISYGHHYSSIGVPSTGFAGPGGFPRNLDAG HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MKPKWDNNDFNGYSRTIPVARWIDCLLEPGKEINYNGGKVKLPDFKMMVISGCNPWHHHQ CCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCEECCCCCEEECCCEEEEEEECCCCHHHHH DRNRMKQAFQKLQTVVTIDFAWTATCRFSDIVLPACTQWERNDIDVYGSYSSRGLIAMHR HHHHHHHHHHHHHHEEEEEEEEEEEEEECCEECCCCCCCCCCCEEEEECCCCCCHHHHHH LVDPLFQSKPDFQIMKELTERFGRSEEYSRGMSEMDWIRSLYNDCKKSNEGKFEMPEFDE HHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FWEKSVLDFGQGQPWVRHADFRQDPEINPLGTPSGFIEITSRKIGRYGYEHCQEHPMWFE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC KSERSHGGPGSDKHPFWLQSCHPDKRLHSQMCESEEFRATYAVKGREPVYINPLDAKAKG CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCHHCCEEEEECCCCCEEECCCCHHHCC IKEGDLVRVFNDRGQLLAGAVLTDSYPRGVIRIEEGAWYGPLNEKVGAIDTYGDPNTLTQ CCCCCEEEEECCCCCEEEHHHHCCCCCCCEEEECCCCEECCCCCCCCCEECCCCCCHHHH DIGSSELAQATSANTCIVDFEKFTGKVPPVTSFGGPIEVA HCCCHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEECC >Mature Secondary Structure AITRRSFLKGVATTSAASVIGPSLLASASANAVETTGTWKVSGSHWGAFRAHIYAGKVQ CCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEECCCEEEECCCCCCCEEEEEEECCCC EIKPIELDQNPTEMLNGIKGIIYSPSRVRYPMVRLDWLKKHKYSADTRGNNRFVRVTWDE CCCCCCCCCCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHH ALDLFYRELERVQKEYGPWALHAGQTGWNQTGSFNNCTAHMQRAVGMHGNYITKVGDYST HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC GAGQTILPYVLGSTEVYAQGTSWSEILENADNIILWANDPVKNLQVGWNCETHESYAYLA CCCCEEHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHH QLKEKVAKGEINVISVDPVKNKTQRYLENDHLYVNPMTDVPFMLAIAHVLYTENLYDKKF HHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHH IETYCLGFEEFINYVQGKTKDKVEKTPEWAAPICGVKADKIREFARMLVKGRTQILMGWC HHHHHCCHHHHHHHHCCCCHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH IQRQEHGEQPYWAAAVVAAMIGQIGLPGGGISYGHHYSSIGVPSTGFAGPGGFPRNLDAG HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MKPKWDNNDFNGYSRTIPVARWIDCLLEPGKEINYNGGKVKLPDFKMMVISGCNPWHHHQ CCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCEECCCCCEEECCCEEEEEEECCCCHHHHH DRNRMKQAFQKLQTVVTIDFAWTATCRFSDIVLPACTQWERNDIDVYGSYSSRGLIAMHR HHHHHHHHHHHHHHEEEEEEEEEEEEEECCEECCCCCCCCCCCEEEEECCCCCCHHHHHH LVDPLFQSKPDFQIMKELTERFGRSEEYSRGMSEMDWIRSLYNDCKKSNEGKFEMPEFDE HHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FWEKSVLDFGQGQPWVRHADFRQDPEINPLGTPSGFIEITSRKIGRYGYEHCQEHPMWFE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC KSERSHGGPGSDKHPFWLQSCHPDKRLHSQMCESEEFRATYAVKGREPVYINPLDAKAKG CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCHHCCEEEEECCCCCEEECCCCHHHCC IKEGDLVRVFNDRGQLLAGAVLTDSYPRGVIRIEEGAWYGPLNEKVGAIDTYGDPNTLTQ CCCCCEEEEECCCCCEEEHHHHCCCCCCCEEEECCCCEECCCCCCCCCEECCCCCCHHHH DIGSSELAQATSANTCIVDFEKFTGKVPPVTSFGGPIEVA HCCCHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]