| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is ttgG [H]
Identifier: 326424092
GI number: 326424092
Start: 2943082
End: 2944197
Strand: Reverse
Name: ttgG [H]
Synonym: NA
Alternate gene names: 326424092
Gene position: 2944197-2943082 (Counterclockwise)
Preceding gene: 27366155
Following gene: 27366153
Centisome position: 89.71
GC content: 48.3
Gene sequence:
>1116_bases GTGAATGGGTTAAAGAGCGAGGGCTATAACGTGAATAAATGGATTGGTTTAACCGCGTTGTCCGCCGCTTTACTGTTAGC CGGATGTGGGCAACAAAATCAGCCAGCCGCTATGGCTGACCCAAATGTCAAAATTGTCTCGTTGACTGACGAAGAGATGA TCGACAGCCTCTATTTCCCTGCTGTAGCAAACGCTGCAGAACGTTCTCACCTCAGTTTTCGAGTCGCTGGAGAAGTCAGG AGCTTATACGTCAAAGAAGGGGATAGGATAAAAAAAGGCGATGTGATTGCTGAACTTGACCCCACTGATTACCGCTTAGA CGTGGATAACGCGCAAGCAAGGTTCTCGGTAGTGGATAGCCAGTTTAAGCGCTCGGAGCCGCTGGTGAAAAAAGGGTTAC TGGCAAAATCTCAGTTTGATGAGATCGCTGCGCAGCGCCAAATTGCACTGGCTGAACTTGAATTGGCAAAACTGCGTCTC TCGTTTACACAGTTAAAAGCACCTGTTGACGGCATCATTTCACGGGTCAGTGTTGATCAATTTGAAAACGTTCAAGTTGG GCAGCAAGTGGTCAACATTCACAGTGTTGATGAAGTCGAAATCTTAATTCAGCTTCCCGATCAGCTGTATGTCAATCAGC CCACCAGAGAAAAGCTTGAGCACGTTGATGCCCTAGTTCGTGTTCGCAGTGGAAATGAGTACTCGGCAAAAATCAAAGAG TTCACCACAGAGCCCGATCCAAAAACAGGCACCTTTACGGTCACGCTGACCATGCCGATGCCGGAAAAAGAGTACATCTT AGACGGCATGGCCGTTGAGGTGACTTCACGAGGAGAAGGGGTCGGGCTGGAGTTGAACTCGGGTATTCGTGTACCGATTG AGGCCATTTTTAATGCCGATGGGGATGAGCTGAATCGAGAGAAAAAATTTGTTTGGGTGTTAAACGCGGACAATAGCGTT AGCAAACGTCAAGTCGTTGTAGGTAAAGCGTCGAAAGAGAGTGCGCAAATTATTGAGGGGCTAACGCATTCAGAGCAAGT GGTGGTGGCGGGTATCGCACGACTGCGCGACGGCATTAAAGTGAATGTGATTTCTCAGGAGGCGAACAATGAGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: membrane-fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
NA
Sequences:
>Translated_371_residues MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAAMADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEHVDALVRVRSGNEYSAKIKE FTTEPDPKTGTFTVTLTMPMPEKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELNREKKFVWVLNADNSV SKRQVVVGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE >Mature_371_residues MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAAMADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEHVDALVRVRSGNEYSAKIKE FTTEPDPKTGTFTVTLTMPMPEKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELNREKKFVWVLNADNSV SKRQVVVGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=325, Percent_Identity=25.2307692307692, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1786668, Length=384, Percent_Identity=23.9583333333333, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789665, Length=372, Percent_Identity=24.1935483870968, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789929, Length=383, Percent_Identity=22.4543080939948, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 40815; Mature: 40815
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAAMADPNVKIVSLTDEEMIDSLYFP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEHVDALVRVRSGNEYSAKIKE HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHH FTTEPDPKTGTFTVTLTMPMPEKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC GDELNREKKFVWVLNADNSVSKRQVVVGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE VNVISQEANNE EEEEECCCCCC >Mature Secondary Structure MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAAMADPNVKIVSLTDEEMIDSLYFP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEHVDALVRVRSGNEYSAKIKE HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHH FTTEPDPKTGTFTVTLTMPMPEKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC GDELNREKKFVWVLNADNSVSKRQVVVGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE VNVISQEANNE EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]