| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 326424068
Identifier: 326424068
GI number: 326424068
Start: 2827322
End: 2828137
Strand: Reverse
Name: 326424068
Synonym: NA
Alternate gene names: NA
Gene position: 2828137-2827322 (Counterclockwise)
Preceding gene: 27366053
Following gene: 27366050
Centisome position: 86.17
GC content: 45.47
Gene sequence:
>816_bases ATGTGTCAATTCAAGACTACATTTACTTGCAAGGGATCACAATTAGGGGGCGTTATGTTCCGTTCAATTTTGTTTCTATT TGCATCCTTGTTGGCAGCAGTCGCGATAGCGAAATCGGATCTTCAATCGATCACTTATCTGACAGAAGAATACCCGCCTT ATAACTTTACCGAAAATGGTGAACTGCACGGCATCGCTGTGGACTTGTTGGTCGCAGCAACGGCAAGGGCAACGCAACCT GTCGCTAAAGAAGACATTTCCGTCCAACCTTGGGCTAGAGCATACCGTACCGTGCTGATCAATAAAGACACGGTGCTTTT TTCGACCACGCGCACCAAATTGAGAGAAAACTTGTTCAATTGGGTAGGGCCGATCAGTGCCACTCGTATTGTTGTCATGG CTAAGAAAAGCGCGCAGATTTCTATTAAGCGCCCTAATGACCTGATTCAATATCGTATCGGTGTGATTCGTGATGATGTT GGTGAACAGCTCCTACTTGAACTAGGCGTCCCGCGTAACTCAATGCAAGAGAGCTCCTATGCCTCTACTTTGGCGGAGCA ACTTTACAAAGGGCGGATCGATCTTTGGGCTTATGAAGAAAATGTCGCGAAATGGTGGATATCCAAAGGTGGATTCAACT CTGCGGATTTTGAACCTGTGTATGTTCTGCAAGAAGGGGAGCTCTATTATGCGTTTAACAAAGATGTTGATGGTGCTTCA GTGAGAGCATTGCAGCAAGCCATTGATGCACTAAAACACACCAGCAATGATGAGAATCAAACCTTCTATCAAAGCATCGT GGGTAAATATCGCTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: amino acid ABC transport signal transduction system, periplasmic protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Periplasmic Protein; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein; Lipoprotein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
NA
Sequences:
>Translated_271_residues MCQFKTTFTCKGSQLGGVMFRSILFLFASLLAAVAIAKSDLQSITYLTEEYPPYNFTENGELHGIAVDLLVAATARATQP VAKEDISVQPWARAYRTVLINKDTVLFSTTRTKLRENLFNWVGPISATRIVVMAKKSAQISIKRPNDLIQYRIGVIRDDV GEQLLLELGVPRNSMQESSYASTLAEQLYKGRIDLWAYEENVAKWWISKGGFNSADFEPVYVLQEGELYYAFNKDVDGAS VRALQQAIDALKHTSNDENQTFYQSIVGKYR >Mature_271_residues MCQFKTTFTCKGSQLGGVMFRSILFLFASLLAAVAIAKSDLQSITYLTEEYPPYNFTENGELHGIAVDLLVAATARATQP VAKEDISVQPWARAYRTVLINKDTVLFSTTRTKLRENLFNWVGPISATRIVVMAKKSAQISIKRPNDLIQYRIGVIRDDV GEQLLLELGVPRNSMQESSYASTLAEQLYKGRIDLWAYEENVAKWWISKGGFNSADFEPVYVLQEGELYYAFNKDVDGAS VRALQQAIDALKHTSNDENQTFYQSIVGKYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30507; Mature: 30507
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQFKTTFTCKGSQLGGVMFRSILFLFASLLAAVAIAKSDLQSITYLTEEYPPYNFTENG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ELHGIAVDLLVAATARATQPVAKEDISVQPWARAYRTVLINKDTVLFSTTRTKLRENLFN CEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHEEEECCCEEEEEHHHHHHHHHHHH WVGPISATRIVVMAKKSAQISIKRPNDLIQYRIGVIRDDVGEQLLLELGVPRNSMQESSY HHCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ASTLAEQLYKGRIDLWAYEENVAKWWISKGGFNSADFEPVYVLQEGELYYAFNKDVDGAS HHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHH VRALQQAIDALKHTSNDENQTFYQSIVGKYR HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MCQFKTTFTCKGSQLGGVMFRSILFLFASLLAAVAIAKSDLQSITYLTEEYPPYNFTENG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ELHGIAVDLLVAATARATQPVAKEDISVQPWARAYRTVLINKDTVLFSTTRTKLRENLFN CEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHEEEECCCEEEEEHHHHHHHHHHHH WVGPISATRIVVMAKKSAQISIKRPNDLIQYRIGVIRDDVGEQLLLELGVPRNSMQESSY HHCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ASTLAEQLYKGRIDLWAYEENVAKWWISKGGFNSADFEPVYVLQEGELYYAFNKDVDGAS HHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHH VRALQQAIDALKHTSNDENQTFYQSIVGKYR HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA