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The map label for this gene is int [H]

Identifier: 326424001

GI number: 326424001

Start: 2438314

End: 2439276

Strand: Reverse

Name: int [H]

Synonym: NA

Alternate gene names: 326424001

Gene position: 2439276-2438314 (Counterclockwise)

Preceding gene: 326424002

Following gene: 326424000

Centisome position: 74.33

GC content: 41.33

Gene sequence:

>963_bases
ATGAAAAATCAGTTTATTTTAAGTGTTCAAGATCATATGCGAACTCGACACTATGCCACAAAAACGATTCAGGCTTACAT
CAGTTGGATTAAACAGTACATCTATTTCCATAGGATGGCACATCCGTCTACATTGAATGAGAAACATGTTGAAGAATTTT
TAACCCACCTCGCTGTTGAACAAAAAGTTGCCGCAAAGACACAAGCACTTGCATTAAACTCCGTTCTATTTCTCTATCGG
GAATATTTCAGAACACCGCTTAATAATGAAATTAAGTTTCAGAAGTCTCTACTCGATAGAAAATTGCCAGTTGTGTTGAC
CAAGCCAGAGCTTCGTGCATTTATTCAACATATAGATCCAAGATATAAACTTCATATTATGCTGTTATATGGCTCTGGAT
TAAGAGTTATGGAGTGCGTTCGTCTTAGAATCCAGGATGTTGATTACCATTATGGAGCACTAAGAGTTTGGCAAGGCAAG
GGAGGGAAAAACCGCACTGTTACACTCGCTAAGGAGTTATATCCCCTCTTGAAAGAGCAAGAGGCATTAGCACTACGTTA
TTATCAAAAAGACAGAATTACTGCGGGTTACGCCGGCGTTTGGTTATCGTCTTCTCTGCAAAGAAAATACCAAGGAGCCG
AAATGGATTTCAACTGGCACTATTTATTCCCATCCGATAGGTTATCAAGAGATCCAGAGTCCGATTTACTCAGAAGACAT
CACATCAACGAGCAAGCTCTTCAAAGGGCCGTAAAGAGAGCGGCAAAAGATGCTGGAATTACCAAGTCCATAAGTTGCCA
CACGCTGAGACATAGCTTTGCAACACACTTACTTGAGTCCGGCGCCGATATTAGAACCGTACAAGAACAGCTAGGCCATT
CTGACGTTAAAACCACCCAGATATACACTCATGTATTAGAAAGAGGTGCGGGCGGAGTCCTAAGCCCTCTATCTAAGCTT
TAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: Integron integrase IntI4

Products: NA

Alternate protein names: E2 protein [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:
NA

Sequences:

>Translated_320_residues
MKNQFILSVQDHMRTRHYATKTIQAYISWIKQYIYFHRMAHPSTLNEKHVEEFLTHLAVEQKVAAKTQALALNSVLFLYR
EYFRTPLNNEIKFQKSLLDRKLPVVLTKPELRAFIQHIDPRYKLHIMLLYGSGLRVMECVRLRIQDVDYHYGALRVWQGK
GGKNRTVTLAKELYPLLKEQEALALRYYQKDRITAGYAGVWLSSSLQRKYQGAEMDFNWHYLFPSDRLSRDPESDLLRRH
HINEQALQRAVKRAAKDAGITKSISCHTLRHSFATHLLESGADIRTVQEQLGHSDVKTTQIYTHVLERGAGGVLSPLSKL
>Mature_320_residues
MKNQFILSVQDHMRTRHYATKTIQAYISWIKQYIYFHRMAHPSTLNEKHVEEFLTHLAVEQKVAAKTQALALNSVLFLYR
EYFRTPLNNEIKFQKSLLDRKLPVVLTKPELRAFIQHIDPRYKLHIMLLYGSGLRVMECVRLRIQDVDYHYGALRVWQGK
GGKNRTVTLAKELYPLLKEQEALALRYYQKDRITAGYAGVWLSSSLQRKYQGAEMDFNWHYLFPSDRLSRDPESDLLRRH
HINEQALQRAVKRAAKDAGITKSISCHTLRHSFATHLLESGADIRTVQEQLGHSDVKTTQIYTHVLERGAGGVLSPLSKL

Specific function: Putative integrase believed to be involved in the insertion of antibiotic resistance genes into plasmids and transposons [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=308, Percent_Identity=30.8441558441558, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790244, Length=192, Percent_Identity=32.2916666666667, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR011946
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37242; Mature: 37242

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQFILSVQDHMRTRHYATKTIQAYISWIKQYIYFHRMAHPSTLNEKHVEEFLTHLAVE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
QKVAAKTQALALNSVLFLYREYFRTPLNNEIKFQKSLLDRKLPVVLTKPELRAFIQHIDP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCC
RYKLHIMLLYGSGLRVMECVRLRIQDVDYHYGALRVWQGKGGKNRTVTLAKELYPLLKEQ
CEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHH
EALALRYYQKDRITAGYAGVWLSSSLQRKYQGAEMDFNWHYLFPSDRLSRDPESDLLRRH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCCHHHHHHHH
HINEQALQRAVKRAAKDAGITKSISCHTLRHSFATHLLESGADIRTVQEQLGHSDVKTTQ
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
IYTHVLERGAGGVLSPLSKL
HHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure
MKNQFILSVQDHMRTRHYATKTIQAYISWIKQYIYFHRMAHPSTLNEKHVEEFLTHLAVE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
QKVAAKTQALALNSVLFLYREYFRTPLNNEIKFQKSLLDRKLPVVLTKPELRAFIQHIDP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCC
RYKLHIMLLYGSGLRVMECVRLRIQDVDYHYGALRVWQGKGGKNRTVTLAKELYPLLKEQ
CEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHH
EALALRYYQKDRITAGYAGVWLSSSLQRKYQGAEMDFNWHYLFPSDRLSRDPESDLLRRH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCCHHHHHHHH
HINEQALQRAVKRAAKDAGITKSISCHTLRHSFATHLLESGADIRTVQEQLGHSDVKTTQ
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
IYTHVLERGAGGVLSPLSKL
HHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821509; 2823258; 3054482; 8195081; 2188588 [H]