Click here to switch to the map view.

The map label for this gene is rimK [H]

Identifier: 326423953

GI number: 326423953

Start: 2156587

End: 2157333

Strand: Reverse

Name: rimK [H]

Synonym: NA

Alternate gene names: 326423953

Gene position: 2157333-2156587 (Counterclockwise)

Preceding gene: 27365483

Following gene: 27365481

Centisome position: 65.73

GC content: 45.11

Gene sequence:

>747_bases
ATGTTTATAAGATTGACGCCAGTACTCGCTCTCGTTTTGTTATCTGGCTGTACTTTAACCAATGGTGAGCAATATCATCA
GAAAACCCTGACCGCCCTCCAAGACTCTGAGACTCGTATTACGAATAAGATAGAGAATCTCACTCTGCAATCCTCAAACC
AAGTCGATTACATCGAGAGCCTTGAGACTCAAATTACCGAGTTACAAAAACAAGTTGAACATCTTCAGTTGACTCAACAG
CAAAGTTTGGCGTCGTCTGAAGAGAAAAAACCTGAACCTAAAGTCATTGCCGCGCCACCAGCACCAGCCAAAAATCAAAT
CATCTTGGGTGCGATTGAAAAAGTGACCATTGAGTCGATCAATCAGTCTTTTGATGCACGTGTTGATACCGGGGCAACCA
CATCATCACTGAATGCCGTTGACATCGAAATGTTCGAGCGCAATGGTAAAGATTGGGTTCGCTTCCACCTCTCAGATCCA
GAACAACCTGGCACTGACCAAAACTGGATTGAAGCACCCGTGATTCGTTATGTGAAGATTCGTCAGTCGACCAACGACGA
TACCGAACGCCGCGCAGTCGTCGAGCTGTGGGTCAAAGTGGGCGAAATCAAAGAAAAGGCGCAATTTACATTGGCAGACC
GCTCACAAATGAGCCATCCCGTTCTTTTAGGTCGTGAGTTTATTCGCGATATTGCTCTTGTTGACGTTAGTCGCAGTTAC
ATTCAAACCGGACAAAAGAAAAAATAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:
NA

Sequences:

>Translated_248_residues
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSETRITNKIENLTLQSSNQVDYIESLETQITELQKQVEHLQLTQQ
QSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESINQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDP
EQPGTDQNWIEAPVIRYVKIRQSTNDDTERRAVVELWVKVGEIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
IQTGQKKK
>Mature_248_residues
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSETRITNKIENLTLQSSNQVDYIESLETQITELQKQVEHLQLTQQ
QSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESINQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDP
EQPGTDQNWIEAPVIRYVKIRQSTNDDTERRAVVELWVKVGEIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
IQTGQKKK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 28027; Mature: 28027

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSETRITNKIENLTLQSSNQVDYIES
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHHH
LETQITELQKQVEHLQLTQQQSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHH
NQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDPEQPGTDQNWIEAPVIRYVKI
HHHHCCCCCCCCCCCCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RQSTNDDTERRAVVELWVKVGEIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQTGQKKK
HHCCCCCC
>Mature Secondary Structure
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSETRITNKIENLTLQSSNQVDYIES
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHHH
LETQITELQKQVEHLQLTQQQSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHH
NQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDPEQPGTDQNWIEAPVIRYVKI
HHHHCCCCCCCCCCCCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RQSTNDDTERRAVVELWVKVGEIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQTGQKKK
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA