| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is rstB [H]
Identifier: 326423919
GI number: 326423919
Start: 2004310
End: 2005944
Strand: Reverse
Name: rstB [H]
Synonym: NA
Alternate gene names: 326423919
Gene position: 2005944-2004310 (Counterclockwise)
Preceding gene: 326423920
Following gene: 27365349
Centisome position: 61.12
GC content: 48.07
Gene sequence:
>1635_bases GTGTGCCTCTTCTTGGGAGGTTTCATTATGATTCGCGCATTTGCCATCTTATGGTTGGCGGTGTTTGTACCGACTACTTT GTTGATCATCCCCAGTGGTGTAAACCCGGTTTTAAAACTCAACGAGCAGTTTTCCGAAGATTTCTATAAGCCGATCTATC GGGTGAACTTTGAGGTGTTGTCCAACAAACTCTTGCAGCAACCCACGACTCAGTGGCAACAAACGATCGACCACTATGCC AAAAGCTTTGCCTATCCTGTGAAGCTCCAAACGTTGGCAGATTACCAAGCCGACAAAGCCATCTATGCTTCACTACAACA AGGCCAAGTAACGTTTCTTTATGCCGACCCAATGGCGCTCTTACAACGAGTTGGTGACAGTGACCAAGTGCTGTATATCG CTCTTAACGAATCCACCGAGCATGCAGTGCTCAATCAGGCCAAGGGTACACTCTCATTAGCGATTGAAGATCTGCGTCAA CTGCCTAAAAGTGAGTGGAAAAACACGCTAGCACAAACCAACGCCAAACTCCCTGTCCACATTAGTTTGACCAACGAAAC GCAACTTAGCGAGACTGCCAAGCTCGCTTTGTTGAACTCCCCCGACGAGATTGTTAGTTATATCAATGATGAGGGACGCG TCGAGCTGCTTGCCCCCATCGATGATGGCTTGTGGTTACACGTCCAAGATAACTTATCGCAAGCCGTACAACTCAAGTTG AGCACCACCATCGCGCTGATGTTCTTCCTACTGATTTCGCTTGCTTTGATTTTGTGGGTTTATCCACTTTGGCGTGACTT AACTCGACTGGTGGCAACCGCCACCGAATTTGGCCAAGGCAAACTGTCACAACGGGCGCGAGCTTCCAAGCTCTCGGTGG TTTCTCAACTCAGTGACTCCTTCAACAACATGGCCGACAATATCGAGAGTCTCATTGCTCGGCAGCGTGAACTGACCAAC GCCGTCGCACACGATTTACGTACGCCATTGTATCGGCTGCGCTTTGCGATTGAGATGCTGGAAGATCCTCACACCAGCGA CGCGCAAAAAGAGAAATATCAACGCGCACTGCACACAAGCATTGATGATCTCGACCATCTCATCAATCAGAATTTACTGC TCTCTCGCTACAATCGGATTGCCGATATCACCCATTTTTCACCATGTTGCTTTGCTAGGGAGTTGCTCAATGAAATCGAT GATTTCAAACTTCAGCATCCCGATCTCGATATCCAGTTTTACTGCTCGCCAGAGTTAAAACAGCACCGCATGTTCATCGA CAACAAAGGATTGATGCGCGCGGTGAAAAACCTTCTTACCAATGCAAGCCGATTTGCTCAAAGTACCATTATTGTCTCGT TTAAATACAGTGGCAGCGCATTTCACATTACGGTGGAAGACGATGGCCAAGGTGTGCCCAATGAACACGCAGAACGCATT TTTGAACCTTTCACTCAGCTTGATAACCAAGCACGCAGTAGCGAAAAAGGACATGGGTTAGGATTGGCGATCGTTAAACA AATCATGCTTTGGCACAAAGGCAACGCGAAAGTGGTGTCATCGACTTTGGGTGGTGCTGCGTTTGAACTGCAGTGGCCTG AGCTGCATCCGAATACTGCCGAGTCGGAATTGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
NA
Sequences:
>Translated_544_residues MCLFLGGFIMIRAFAILWLAVFVPTTLLIIPSGVNPVLKLNEQFSEDFYKPIYRVNFEVLSNKLLQQPTTQWQQTIDHYA KSFAYPVKLQTLADYQADKAIYASLQQGQVTFLYADPMALLQRVGDSDQVLYIALNESTEHAVLNQAKGTLSLAIEDLRQ LPKSEWKNTLAQTNAKLPVHISLTNETQLSETAKLALLNSPDEIVSYINDEGRVELLAPIDDGLWLHVQDNLSQAVQLKL STTIALMFFLLISLALILWVYPLWRDLTRLVATATEFGQGKLSQRARASKLSVVSQLSDSFNNMADNIESLIARQRELTN AVAHDLRTPLYRLRFAIEMLEDPHTSDAQKEKYQRALHTSIDDLDHLINQNLLLSRYNRIADITHFSPCCFARELLNEID DFKLQHPDLDIQFYCSPELKQHRMFIDNKGLMRAVKNLLTNASRFAQSTIIVSFKYSGSAFHITVEDDGQGVPNEHAERI FEPFTQLDNQARSSEKGHGLGLAIVKQIMLWHKGNAKVVSSTLGGAAFELQWPELHPNTAESEL >Mature_544_residues MCLFLGGFIMIRAFAILWLAVFVPTTLLIIPSGVNPVLKLNEQFSEDFYKPIYRVNFEVLSNKLLQQPTTQWQQTIDHYA KSFAYPVKLQTLADYQADKAIYASLQQGQVTFLYADPMALLQRVGDSDQVLYIALNESTEHAVLNQAKGTLSLAIEDLRQ LPKSEWKNTLAQTNAKLPVHISLTNETQLSETAKLALLNSPDEIVSYINDEGRVELLAPIDDGLWLHVQDNLSQAVQLKL STTIALMFFLLISLALILWVYPLWRDLTRLVATATEFGQGKLSQRARASKLSVVSQLSDSFNNMADNIESLIARQRELTN AVAHDLRTPLYRLRFAIEMLEDPHTSDAQKEKYQRALHTSIDDLDHLINQNLLLSRYNRIADITHFSPCCFARELLNEID DFKLQHPDLDIQFYCSPELKQHRMFIDNKGLMRAVKNLLTNASRFAQSTIIVSFKYSGSAFHITVEDDGQGVPNEHAERI FEPFTQLDNQARSSEKGHGLGLAIVKQIMLWHKGNAKVVSSTLGGAAFELQWPELHPNTAESEL
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=398, Percent_Identity=32.4120603015075, Blast_Score=188, Evalue=8e-49, Organism=Escherichia coli, GI1790346, Length=266, Percent_Identity=30.8270676691729, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1789808, Length=346, Percent_Identity=28.0346820809249, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1786783, Length=234, Percent_Identity=29.4871794871795, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI48994928, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=25.78125, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=28.3333333333333, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1789403, Length=247, Percent_Identity=27.9352226720648, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788549, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI87082128, Length=305, Percent_Identity=24.5901639344262, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61554; Mature: 61554
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLFLGGFIMIRAFAILWLAVFVPTTLLIIPSGVNPVLKLNEQFSEDFYKPIYRVNFEVL CEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SNKLLQQPTTQWQQTIDHYAKSFAYPVKLQTLADYQADKAIYASLQQGQVTFLYADPMAL HHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH LQRVGDSDQVLYIALNESTEHAVLNQAKGTLSLAIEDLRQLPKSEWKNTLAQTNAKLPVH HHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEE ISLTNETQLSETAKLALLNSPDEIVSYINDEGRVELLAPIDDGLWLHVQDNLSQAVQLKL EEECCCHHHHHHHHEEEECCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHH STTIALMFFLLISLALILWVYPLWRDLTRLVATATEFGQGKLSQRARASKLSVVSQLSDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FNNMADNIESLIARQRELTNAVAHDLRTPLYRLRFAIEMLEDPHTSDAQKEKYQRALHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC IDDLDHLINQNLLLSRYNRIADITHFSPCCFARELLNEIDDFKLQHPDLDIQFYCSPELK HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH QHRMFIDNKGLMRAVKNLLTNASRFAQSTIIVSFKYSGSAFHITVEDDGQGVPNEHAERI HHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHH FEPFTQLDNQARSSEKGHGLGLAIVKQIMLWHKGNAKVVSSTLGGAAFELQWPELHPNTA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHCCCCEEEEECCCCCCCCC ESEL CCCC >Mature Secondary Structure MCLFLGGFIMIRAFAILWLAVFVPTTLLIIPSGVNPVLKLNEQFSEDFYKPIYRVNFEVL CEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SNKLLQQPTTQWQQTIDHYAKSFAYPVKLQTLADYQADKAIYASLQQGQVTFLYADPMAL HHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH LQRVGDSDQVLYIALNESTEHAVLNQAKGTLSLAIEDLRQLPKSEWKNTLAQTNAKLPVH HHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEE ISLTNETQLSETAKLALLNSPDEIVSYINDEGRVELLAPIDDGLWLHVQDNLSQAVQLKL EEECCCHHHHHHHHEEEECCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHH STTIALMFFLLISLALILWVYPLWRDLTRLVATATEFGQGKLSQRARASKLSVVSQLSDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FNNMADNIESLIARQRELTNAVAHDLRTPLYRLRFAIEMLEDPHTSDAQKEKYQRALHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC IDDLDHLINQNLLLSRYNRIADITHFSPCCFARELLNEIDDFKLQHPDLDIQFYCSPELK HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH QHRMFIDNKGLMRAVKNLLTNASRFAQSTIIVSFKYSGSAFHITVEDDGQGVPNEHAERI HHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHH FEPFTQLDNQARSSEKGHGLGLAIVKQIMLWHKGNAKVVSSTLGGAAFELQWPELHPNTA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHCCCCEEEEECCCCCCCCC ESEL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]