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The map label for this gene is glpR [H]

Identifier: 326423889

GI number: 326423889

Start: 1777368

End: 1778135

Strand: Reverse

Name: glpR [H]

Synonym: NA

Alternate gene names: 326423889

Gene position: 1778135-1777368 (Counterclockwise)

Preceding gene: 27365141

Following gene: 27365139

Centisome position: 54.18

GC content: 48.57

Gene sequence:

>768_bases
GTGAAACAGATTCCAAGACACCAACAAATTATCGAGATGGTGAAAAAACAAGGCTACGTGAGCACCGACGAGCTAGTCGA
GAAGTTCAATGTCAGCCCACAAACGATTCGCCGCGATCTGAATGAGCTTGCCGATGCAAACAAAATTCGCCGCTACCATG
GTGGTGCGACCATCCCACTGAGTTCAGAGAACACCTCTTACTCCACGCGCAAAAAAGAACATTTCACCGAAAAAGATTTG
ATTGCCGAAGAGTTGGTGCAGCACATTCCCGATGGAGCAACGCTGTTTATTGATATCGGCACCACACCAGAAGCGGTGGC
CAAAGCACTGAATAAAAACCACAAGCAACTGCGCGTTGTCACCAACAACATCAACGTTGCCAGTATTTTGCTGAGCAATC
CTGAGATTAAAGTGATTCTCGCCGGTGGCGAAGTTCGCAACCGTGATGGCGGTATCGTCGGTGAAGCAACACTCGACTTC
ATCAAGCAGTTCCGTTTGGACTTCGGCATTCTAGGCATCAGTGGCATCGATTACGATGGCTCACTGCTCGATTTCGACTA
CCATGAAGTGCGCGTGAAACAAGCTATCATCGAAAACAGTCGCAGCGTGTATCTGGCCGTTGACCACAGTAAATTTGGCC
GCAATGCGATGGTTAAGCTGGGGAATATTTCGCAAATCAATATGCTGATCACCAATGAACAGCCACCAGAAGAGATCACG
GCGATTTTGAAAGAGCAGCAGATCCCTTGCGTTGTCGCAGGCGAATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: glycerol-3-phosphate regulon repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:
NA

Sequences:

>Translated_255_residues
MKQIPRHQQIIEMVKKQGYVSTDELVEKFNVSPQTIRRDLNELADANKIRRYHGGATIPLSSENTSYSTRKKEHFTEKDL
IAEELVQHIPDGATLFIDIGTTPEAVAKALNKNHKQLRVVTNNINVASILLSNPEIKVILAGGEVRNRDGGIVGEATLDF
IKQFRLDFGILGISGIDYDGSLLDFDYHEVRVKQAIIENSRSVYLAVDHSKFGRNAMVKLGNISQINMLITNEQPPEEIT
AILKEQQIPCVVAGE
>Mature_255_residues
MKQIPRHQQIIEMVKKQGYVSTDELVEKFNVSPQTIRRDLNELADANKIRRYHGGATIPLSSENTSYSTRKKEHFTEKDL
IAEELVQHIPDGATLFIDIGTTPEAVAKALNKNHKQLRVVTNNINVASILLSNPEIKVILAGGEVRNRDGGIVGEATLDF
IKQFRLDFGILGISGIDYDGSLLDFDYHEVRVKQAIIENSRSVYLAVDHSKFGRNAMVKLGNISQINMLITNEQPPEEIT
AILKEQQIPCVVAGE

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=248, Percent_Identity=64.9193548387097, Blast_Score=331, Evalue=3e-92,
Organism=Escherichia coli, GI87082344, Length=251, Percent_Identity=39.0438247011952, Blast_Score=211, Evalue=5e-56,
Organism=Escherichia coli, GI1788069, Length=253, Percent_Identity=32.0158102766798, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI226510968, Length=254, Percent_Identity=30.7086614173228, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789170, Length=233, Percent_Identity=28.755364806867, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789519, Length=253, Percent_Identity=26.8774703557312, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789059, Length=264, Percent_Identity=29.9242424242424, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787540, Length=229, Percent_Identity=30.5676855895196, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790753, Length=238, Percent_Identity=25.6302521008403, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790635, Length=254, Percent_Identity=25.5905511811024, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787063, Length=245, Percent_Identity=24.0816326530612, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 28487; Mature: 28487

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIPRHQQIIEMVKKQGYVSTDELVEKFNVSPQTIRRDLNELADANKIRRYHGGATIPL
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SSENTSYSTRKKEHFTEKDLIAEELVQHIPDGATLFIDIGTTPEAVAKALNKNHKQLRVV
CCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEE
TNNINVASILLSNPEIKVILAGGEVRNRDGGIVGEATLDFIKQFRLDFGILGISGIDYDG
ECCCCEEEEEECCCCEEEEEECCCEECCCCCEECHHHHHHHHHHHHHHEEEEECCCCCCC
SLLDFDYHEVRVKQAIIENSRSVYLAVDHSKFGRNAMVKLGNISQINMLITNEQPPEEIT
CEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCHHHHH
AILKEQQIPCVVAGE
HHHHHCCCCEEEECC
>Mature Secondary Structure
MKQIPRHQQIIEMVKKQGYVSTDELVEKFNVSPQTIRRDLNELADANKIRRYHGGATIPL
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SSENTSYSTRKKEHFTEKDLIAEELVQHIPDGATLFIDIGTTPEAVAKALNKNHKQLRVV
CCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEE
TNNINVASILLSNPEIKVILAGGEVRNRDGGIVGEATLDFIKQFRLDFGILGISGIDYDG
ECCCCEEEEEECCCCEEEEEECCCEECCCCCEECHHHHHHHHHHHHHHEEEEECCCCCCC
SLLDFDYHEVRVKQAIIENSRSVYLAVDHSKFGRNAMVKLGNISQINMLITNEQPPEEIT
CEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCHHHHH
AILKEQQIPCVVAGE
HHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955387; 3045764; 9278503 [H]