| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yhbV [H]
Identifier: 326423874
GI number: 326423874
Start: 1698003
End: 1698908
Strand: Reverse
Name: yhbV [H]
Synonym: NA
Alternate gene names: 326423874
Gene position: 1698908-1698003 (Counterclockwise)
Preceding gene: 27365073
Following gene: 27365049
Centisome position: 51.77
GC content: 48.68
Gene sequence:
>906_bases ATGGCAATAAGGATTCAAGGAAACAAGATGAAATACTCACTCGGTCCGCTACTTTACTTCTGGCCCAAACAGAACGTTGA AGACTTTTACCATCAAGCGAAAAACAGCTCTGCCGACATCATCTATTTGGGGGAATCGGTCTGCTCTAAACGCCGTGAAA TGAAACCCGCGCACTGGTTTGAGTTGGCGAAAGAGCTTTCCAGTGCAGGCAAGCAAGTGGTGCTTTCTACCATGGCACTG CTCGAAGCCCCAAGCGAAGTCAACGTGATGAAAAAGTACATCGACAATGGTGACTTTGCCATTGAAGCGAACGACGTATC GGCTATTCAGTTGGCGTTTGAAAAGCGTGTTCCCTTTGTTGTAGGCCCAGCAGTCAACACATACAATGCGCACACGCTTA AATTGTTCCTTAAACAAGGGATGATTCGTTGGTGCATGCCTGTCGAGCTGTCTCGTGAATGGCTGCAAAACGTATTAACC CAATGCGATGAAGTGGGCATTCGCAACCAATTTGACGTAGAAGTCTTTAGCCATGGCTATTTGCCGCTCGCCTATTCCGC ACGCTGCTTTACCGCCCGTGCAGAAAACAAAGCCAAAGACGATTGTGAAACCTGCTGCATCAAATACCCAACGGGCATTC AAGTGCACAGCCAAGAAGGCCAAGCGGTATTCAATCTCAATGGCATCCAGACGCAATCCGGTTACTGCTACAACCTGATT AATGATCTCCCTGCCATGCAAGGATTGGTGGATGTGGTGCGTGTCAGCCCATTAGGGTTAGAGACATTTACGACCGTCGA TCAATTTCGCGCCAACGAACAAGGCGCACAGCCGCGTCAAATCGAAGACCGTCAATGCAATGGCTACTGGCACCAAATTG CAGGCCTAGAGGTGAAAAATCTCTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: putative protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
NA
Sequences:
>Translated_301_residues MAIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWFELAKELSSAGKQVVLSTMAL LEAPSEVNVMKKYIDNGDFAIEANDVSAIQLAFEKRVPFVVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLT QCDEVGIRNQFDVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKNL >Mature_300_residues AIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWFELAKELSSAGKQVVLSTMALL EAPSEVNVMKKYIDNGDFAIEANDVSAIQLAFEKRVPFVVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQ CDEVGIRNQFDVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLIN DLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082220, Length=291, Percent_Identity=63.2302405498282, Blast_Score=408, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001539 [H]
Pfam domain/function: PF01136 Peptidase_U32 [H]
EC number: NA
Molecular weight: Translated: 34076; Mature: 33945
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWF CEEEEECCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCCHHHHH ELAKELSSAGKQVVLSTMALLEAPSEVNVMKKYIDNGDFAIEANDVSAIQLAFEKRVPFV HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCCEE VGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQCDEVGIRNQFDVEVFSHGY ECCCCCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC LPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI EEEEECCEEEEECCCCCCCCCHHHEEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHH NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKN HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECC L C >Mature Secondary Structure AIRIQGNKMKYSLGPLLYFWPKQNVEDFYHQAKNSSADIIYLGESVCSKRREMKPAHWF EEEEECCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCCHHHHH ELAKELSSAGKQVVLSTMALLEAPSEVNVMKKYIDNGDFAIEANDVSAIQLAFEKRVPFV HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCCEE VGPAVNTYNAHTLKLFLKQGMIRWCMPVELSREWLQNVLTQCDEVGIRNQFDVEVFSHGY ECCCCCCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC LPLAYSARCFTARAENKAKDDCETCCIKYPTGIQVHSQEGQAVFNLNGIQTQSGYCYNLI EEEEECCEEEEECCCCCCCCCHHHEEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHH NDLPAMQGLVDVVRVSPLGLETFTTVDQFRANEQGAQPRQIEDRQCNGYWHQIAGLEVKN HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]