Click here to switch to the map view.

The map label for this gene is yibP [H]

Identifier: 326423817

GI number: 326423817

Start: 1260017

End: 1261180

Strand: Reverse

Name: yibP [H]

Synonym: NA

Alternate gene names: 326423817

Gene position: 1261180-1260017 (Counterclockwise)

Preceding gene: 27364677

Following gene: 27364670

Centisome position: 38.43

GC content: 47.51

Gene sequence:

>1164_bases
ATGCTTATTTCATTGATAGCTCAGGAAAGAACGTACGTGGCAAAACAGAAAACCAACAAATCAGGCTTTTTTTTCCTTTC
CACCTGCGTTCTTCTTACTGTTCTGAGCTTCCCGACCAATGGGGCGAGTCCAAGTGAGCTACAAGGGGTCAAAAATGAAA
TTTCTCGCCAGCAAAAAGCCTTATCGAATCAAGAGAAGCAGCTCGACGAGTTGCAAAAATCGCTGCGCAGCCAAGAGACA
AGCATCGCGCAATTAGAGAAAGAGATTAAGCAAACTAAGCAAGCGTTGGCCACGGCAAAAGCGAATGTGGGGCAGTTGCA
ACGCAAAATGGATGAACTTGAAGGCCAAAAGAAAGCGCAAACTGAACGCTTAGAAACCCTCATCCAGACCTACTATGTCA
CCCAAAGAGCCAATGCCTCTGCCTCATTACTGCAACAGGGCGTCGAAGAAGATCGCATTAGCCAATATTTCCAGCATCTC
GCCAAAGCGAGAGCGGAAACCATCAACGAGTTAGAATCCACCAAGAAACAACTTGAACAAAGTCAGCAGCAGTTGCTGAA
TGAGCAAAGTCAGATCGAATCTTTACTCAAGCAACAATCGACGAAACACGAACAACTGGCGAAAACTCAAGGCCAGCGTA
AAAAGACACTCGGTAACATCAAACAAAGTATTTCCAGCGACAAAAACTACCTCGCAGAGCTGCAGCGTAATGAAACTCGT
CTGAAAGCAGAAATTGCTAAAGCGGCTAAACGCAATGCCATTCCTATGGACGGTTTGGCCAAACAAGCCGGGAAGCTCCC
TTGGCCATTAAAAGGCTCAATACTGCACCAATTCGGAACCAAACAGACGGGACAAATCAACTGGAAAGGCATTGTTATCG
CAGCTCGCTATGGTGAACAAGTCAAGTCGGTTTACCCTGGTACGGTGGTATTTGCTGAGTATTTAAGAGGCTATGGCCTC
GTGGTGTTGATAGACCACGGCAAAGGCGACATGACCTTGTATGGCTACAACCAGGCTTTGTTGAAAAAAGAAGGCGACAA
AGTCACCGCTGGCGAAGTGATCGCCCTTGCTGGCGACACGGGCGGGCAAGATCGAGCTTCACTTTACTTCGAAATTCGCC
GCAATAGTGAAGCGCAAAACCCGCGTAACTGGCTGGTCCGTTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: membrane-bound metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:
NA

Sequences:

>Translated_387_residues
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTVLSFPTNGASPSELQGVKNEISRQQKALSNQEKQLDELQKSLRSQET
SIAQLEKEIKQTKQALATAKANVGQLQRKMDELEGQKKAQTERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHL
AKARAETINELESTKKQLEQSQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
LKAEIAKAAKRNAIPMDGLAKQAGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQVKSVYPGTVVFAEYLRGYGL
VVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDTGGQDRASLYFEIRRNSEAQNPRNWLVR
>Mature_387_residues
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTVLSFPTNGASPSELQGVKNEISRQQKALSNQEKQLDELQKSLRSQET
SIAQLEKEIKQTKQALATAKANVGQLQRKMDELEGQKKAQTERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHL
AKARAETINELESTKKQLEQSQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
LKAEIAKAAKRNAIPMDGLAKQAGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQVKSVYPGTVVFAEYLRGYGL
VVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDTGGQDRASLYFEIRRNSEAQNPRNWLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=403, Percent_Identity=33.2506203473945, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=36.1344537815126, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082174, Length=121, Percent_Identity=35.5371900826446, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081989, Length=162, Percent_Identity=32.0987654320988, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43399; Mature: 43399

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTVLSFPTNGASPSELQGVKNEISRQQKA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSNQEKQLDELQKSLRSQETSIAQLEKEIKQTKQALATAKANVGQLQRKMDELEGQKKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHLAKARAETINELESTKKQLEQ
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAEIAKAAKRNAIPMDGLAKQAGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQ
HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEHHHHH
VKSVYPGTVVFAEYLRGYGLVVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDT
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEECCC
GGQDRASLYFEIRRNSEAQNPRNWLVR
CCCCHHHEEEEEECCCCCCCCHHCCCC
>Mature Secondary Structure
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTVLSFPTNGASPSELQGVKNEISRQQKA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSNQEKQLDELQKSLRSQETSIAQLEKEIKQTKQALATAKANVGQLQRKMDELEGQKKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHLAKARAETINELESTKKQLEQ
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAEIAKAAKRNAIPMDGLAKQAGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQ
HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEHHHHH
VKSVYPGTVVFAEYLRGYGLVVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDT
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEECCC
GGQDRASLYFEIRRNSEAQNPRNWLVR
CCCCHHHEEEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]