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The map label for this gene is 326423798

Identifier: 326423798

GI number: 326423798

Start: 1092238

End: 1092810

Strand: Reverse

Name: 326423798

Synonym: NA

Alternate gene names: NA

Gene position: 1092810-1092238 (Counterclockwise)

Preceding gene: 27364517

Following gene: 27364515

Centisome position: 33.3

GC content: 47.82

Gene sequence:

>573_bases
ATGAGTGCACAATCGACTTCTCTTACCCATATCATTCAGCAGTGGCAAGCCGGTGACAAAGAAGCCGAAAGCCAGCTGTA
TCAATTCGCCTACTTACAACTGCGCAAAATTGCCCAGCAAGAACGCGAGCGCAACGCCGAAAAGTATGGTCTTGAAAACG
AAGTGTTGGCAGACAGCGTGAACAGCACCACCGCTTTGATCCACGATGCGTACCTTAAGCTTTCCACCAGCGACATGAGT
GAAATCAGCGGCAAGCGCGATTTTTTCCTCATGGCCGCCAAAGTGATGCGCCAAATCTTGATCGACAATGCACGTTCACT
GCAAGCACAAAAACGTCAGCAAGTGACACAGCTACCGAGTGAACATCAGGAAAAATTTGAGCAGTTGATCATCATGGACA
AAGCACTGGATAACTTCAGTGTTCGCTACCCTCGTCAGTCCAACGCGCTCAAACTGAAGTACTTGATGGGGATGAAAAAC
CAAGAGATCAGTGAGTTACTCGAATGCAGTGCCAGTTTGATTGAAAAAGACCTCAAGTTCTCACGCAGTTGGCTGCAATC
ACGAATGGCATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: DNA-directed RNA polymerase specialized sigma subunit

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-E Factor; Extracytoplasmic Sigma Factor ECF; ECF Sigma Factor Family Protein; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:
NA

Sequences:

>Translated_190_residues
MSAQSTSLTHIIQQWQAGDKEAESQLYQFAYLQLRKIAQQERERNAEKYGLENEVLADSVNSTTALIHDAYLKLSTSDMS
EISGKRDFFLMAAKVMRQILIDNARSLQAQKRQQVTQLPSEHQEKFEQLIIMDKALDNFSVRYPRQSNALKLKYLMGMKN
QEISELLECSASLIEKDLKFSRSWLQSRMA
>Mature_189_residues
SAQSTSLTHIIQQWQAGDKEAESQLYQFAYLQLRKIAQQERERNAEKYGLENEVLADSVNSTTALIHDAYLKLSTSDMSE
ISGKRDFFLMAAKVMRQILIDNARSLQAQKRQQVTQLPSEHQEKFEQLIIMDKALDNFSVRYPRQSNALKLKYLMGMKNQ
EISELLECSASLIEKDLKFSRSWLQSRMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21985; Mature: 21854

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQSTSLTHIIQQWQAGDKEAESQLYQFAYLQLRKIAQQERERNAEKYGLENEVLADSV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NSTTALIHDAYLKLSTSDMSEISGKRDFFLMAAKVMRQILIDNARSLQAQKRQQVTQLPS
CHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCH
EHQEKFEQLIIMDKALDNFSVRYPRQSNALKLKYLMGMKNQEISELLECSASLIEKDLKF
HHHHHHHHHHHHHHHHCCCEECCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRSWLQSRMA
HHHHHHHHCC
>Mature Secondary Structure 
SAQSTSLTHIIQQWQAGDKEAESQLYQFAYLQLRKIAQQERERNAEKYGLENEVLADSV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NSTTALIHDAYLKLSTSDMSEISGKRDFFLMAAKVMRQILIDNARSLQAQKRQQVTQLPS
CHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCH
EHQEKFEQLIIMDKALDNFSVRYPRQSNALKLKYLMGMKNQEISELLECSASLIEKDLKF
HHHHHHHHHHHHHHHHCCCEECCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRSWLQSRMA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA