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The map label for this gene is rfaF [C]

Identifier: 326423773

GI number: 326423773

Start: 826701

End: 827735

Strand: Reverse

Name: rfaF [C]

Synonym: NA

Alternate gene names: 326423773

Gene position: 827735-826701 (Counterclockwise)

Preceding gene: 27364269

Following gene: 27364264

Centisome position: 25.22

GC content: 48.12

Gene sequence:

>1035_bases
ATGAAAAAAATACTGGTTATCCGGAATGATAAAATTGGCGACTTTATGCTTGCGTGGCCAAGTTTCGCCATGCTCAAGCA
ATCGATGCCAGAAGCGCACATTACCGCTTTAGTACCAAGTTATACGCAAGAGTTGGCGCGACTTTGCCCATGGATTGACG
ATGTATTATTGGACCCAACTGAAAAGGCAGGCAAAGAAGCCACGAAGCAGTTGGTTCAGGAGATCAAGTCACGTCAGTTT
GATGCCTCAATCAACTTGTTTTCGACAACGTATAATGCGTTACTCGTGTGGAAAGCGGGCATTAAGTATCGCTTGGCACC
TGCAACAAAAATCGCACAGATTTTTTATAACCGCAGAATTAAGCAGAAACGCTCACAATCCGCCAAACCGGAATATCAGT
ACAATCTTGATCTCATTCGCACCTTCTTGAATGAGCAAAAAGTCACGGCAGTTGAGCCTCAAGCGCCTTTTCTTTCGTTT
GACGAAACCGAATTGAGTGTGCAAAAACTCAAGCTCAGCGAACAGCTCAGCATTGAAGCGCATAAGGCTTGGGTGATGGT
GCATGCCGGCACGGGTGGCTCAGCCAATAACCTGACATTGTCACAATATGCCGAGTTGCTAAAAGGGATCGAGCAAGATT
TTCAACTGATTGTCACGGCGGGGCCGGGGGAAACGGAAAAAGCACAACAGCTATTGAAAGAATACGCTCAGTTAGGTGGC
CAAGGGGTGGTGTATGACAAGAATGAAGGCCTTGTCGACTTTACGCGCTCCATTGCCTGCGCTGATCTATTTATTGCTGG
CTCAACAGGACCGTTGCATATTGCGGCGACCTTGGATGTTCCAACTGTCGGATTTTTTCCAAGTAAGCGTTCTTCAACGC
CATTGCGCTGGAGACCACTCAACTCAGAAGGACGCCATCTGGCGTTTTGCCCACCAAAAGGTGGCGGTGAAGCAATGGAA
GCGGATATGAGCCGCATCGACATTGATGCGGCGCTGGTGCAGCTTAATCCTTGGGTTTCTCCGTACTTGTCCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: ADP-heptose--lipooligosaccharide heptosyltransferase II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:
NA

Sequences:

>Translated_344_residues
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPTEKAGKEATKQLVQEIKSRQF
DASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRIKQKRSQSAKPEYQYNLDLIRTFLNEQKVTAVEPQAPFLSF
DETELSVQKLKLSEQLSIEAHKAWVMVHAGTGGSANNLTLSQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPLNSEGRHLAFCPPKGGGEAME
ADMSRIDIDAALVQLNPWVSPYLS
>Mature_344_residues
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPTEKAGKEATKQLVQEIKSRQF
DASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRIKQKRSQSAKPEYQYNLDLIRTFLNEQKVTAVEPQAPFLSF
DETELSVQKLKLSEQLSIEAHKAWVMVHAGTGGSANNLTLSQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPLNSEGRHLAFCPPKGGGEAME
ADMSRIDIDAALVQLNPWVSPYLS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38290; Mature: 38290

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPT
CCEEEEEECCCCCCEEEECCHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCHHHHHHCCCC
EKAGKEATKQLVQEIKSRQFDASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRI
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEECCHHHHHHHHHHHHH
KQKRSQSAKPEYQYNLDLIRTFLNEQKVTAVEPQAPFLSFDETELSVQKLKLSEQLSIEA
HHHHHCCCCCCEEECHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCEEE
HKAWVMVHAGTGGSANNLTLSQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPL
CEEEEECCCCHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
NSEGRHLAFCPPKGGGEAMEADMSRIDIDAALVQLNPWVSPYLS
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MKKILVIRNDKIGDFMLAWPSFAMLKQSMPEAHITALVPSYTQELARLCPWIDDVLLDPT
CCEEEEEECCCCCCEEEECCHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCHHHHHHCCCC
EKAGKEATKQLVQEIKSRQFDASINLFSTTYNALLVWKAGIKYRLAPATKIAQIFYNRRI
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEECCHHHHHHHHHHHHH
KQKRSQSAKPEYQYNLDLIRTFLNEQKVTAVEPQAPFLSFDETELSVQKLKLSEQLSIEA
HHHHHCCCCCCEEECHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCEEE
HKAWVMVHAGTGGSANNLTLSQYAELLKGIEQDFQLIVTAGPGETEKAQQLLKEYAQLGG
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
QGVVYDKNEGLVDFTRSIACADLFIAGSTGPLHIAATLDVPTVGFFPSKRSSTPLRWRPL
CEEEEECCCCHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
NSEGRHLAFCPPKGGGEAMEADMSRIDIDAALVQLNPWVSPYLS
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]