Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

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The map label for this gene is nutA

Identifier: 326423671

GI number: 326423671

Start: 240949

End: 242610

Strand: Reverse

Name: nutA

Synonym: NA

Alternate gene names: 326423671

Gene position: 242610-240949 (Counterclockwise)

Preceding gene: 27363730

Following gene: 27363728

Centisome position: 7.39

GC content: 48.26

Gene sequence:

>1662_bases
ATGAAGCAACGCCTGATTGTAAAAACCGCGCTTAGCGCAGCTATTCTGGCAACTCTGGCGGGTTGTGCAACTCAGCCAAC
TCAAGAATGGGCAGCAGATACAACTTACAAACTGACAGTACTGCACACGAACGACCACCACGGCCGTTTCTGGCAAAACA
AATACGGTGAGTACGGTATGGCAGCTCGCAAAACTCTGATCGATGAGTTGCGTGCTGAAATCCAAGCGGAAGGCGGCAGC
GTACTGCTACTTTCAGGTGGTGATATCAACACAGGTGTTCCTGAGTCAGACCTTCAAGATGCTGAGCCAGATTTCAAAGG
CATGAGCAAAATCGGTTACGACGCAATGGCGCTGGGTAACCACGAGTTTGACAATCCTCTAGACGTACTGATGAAGCAGA
AAGAGTGGGCTAACTTCCCAATGCTGTCTGCCAACATTTACGACAAGAAAACCGGCGAGCGCATGTTCCAAGCTTACGAG
ATGTTCGATAAGCAAGGTATCAAAATTGCGGTTATCGGTCTAACAACCGAAGATACAGCTAAGCTAGGCAACCCAGAATT
CATCGGCGCCATTGACTTCCGTGATCCGAAGGAAGAAGCGAAGAAGCTGATTGCTGAGCTAAAAGAAACAGAAAAACCAG
ATTTGATCTTCGCCGTGACGCACATGGGTCACTACGAAGATGGTAAGCGTGGCATCAACGCTCCTGGCGATGTGGCACTG
GCTCGTTACCTAAACGAAGGTGACCTAGACATGATCGTCGGTGGTCACTCGCAAGAGCCGGTTTGTATGGAAGCACCAAA
TGTGGTGAAGAAAAACTTCAAACCAGCAGACGAGTGTAAGCCAGACCAACAAAACGGTACTTACATCGTGCAAGCGCACG
AGTGGGGTAAATACGTTGGCCGTGCTGATTACGAGTTCCGCAATGGTGAGCTACGTATGGTGAGCTACGATCTGATTCCG
GTTAACCTGAAGAAGAAAGTGGAAGTCGATGGTAAGAGCCAGCGCGTCTTCATTGAAAGCGAAATTAAAGAAGATACTGC
ATTGCTAGAGTTCCTACGTCCTTACCAAGAGAAAGGTCAAGAGCAACTTAACGTGAAGATTGCAGACACAAACGGCAAGC
TTGAAGGTGACCGTAACGTGGTTCGCTTCCAGCAAACTAACCTAGGTCGTTTGATCGCAGTATCACACATGGAGCGTGCA
AAAGCAGACTTCGCAGTAATGAACTCGGGTGGTGTACGTGACTCGATTGAAGCGGGTGAAGTGACTTACAAAGACGTCCT
TACCGTTCAGCCTTTTGCAAACATCCTGACTTACACCGATATGACGGGTAAAGAAGTGCTGGACTACCTAAACGTAGTTG
CAACGAAACCTGTTGATTCAGGTGCTTACGCGCAATTCGCCGGTATCTCAATGACAGTGGCTAACGGCAAAGTATCGAAC
GTATTCATTGGTGGCAAACAGCTTCGTCTAGATGAAACTTACCGCTTCACCGTACCAAGCTACAACGCCGCGGGTGGTGA
TGGTTACCCTAAACTGACTGGTCACCCTGGTTACGTGAACACTGGTTTTGTGGATGCTGAAGTACTGAAAGAGTTCCTAG
AGAAGAACAGCCCAATCGATGTGAACAAGTTCGCGCCAAATGGTGAGATTGTTTACAAATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: UDP-sugar hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:
NA

Sequences:

>Translated_553_residues
MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGMAARKTLIDELRAEIQAEGGS
VLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGNHEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYE
MFDKQGIKIAVIGLTTEDTAKLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL
ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVGRADYEFRNGELRMVSYDLIP
VNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQEQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERA
KADFAVMNSGGVRDSIEAGEVTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN
VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPIDVNKFAPNGEIVYK
>Mature_553_residues
MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGMAARKTLIDELRAEIQAEGGS
VLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGNHEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYE
MFDKQGIKIAVIGLTTEDTAKLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL
ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVGRADYEFRNGELRMVSYDLIP
VNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQEQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERA
KADFAVMNSGGVRDSIEAGEVTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN
VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPIDVNKFAPNGEIVYK

Specific function: Degradation of extracellular 5'-nucleotides for nutritional needs

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family

Homologues:

Organism=Homo sapiens, GI4505467, Length=550, Percent_Identity=23.6363636363636, Blast_Score=106, Evalue=6e-23,
Organism=Escherichia coli, GI1786687, Length=549, Percent_Identity=61.0200364298725, Blast_Score=723, Evalue=0.0,
Organism=Escherichia coli, GI1790658, Length=490, Percent_Identity=23.265306122449, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19922446, Length=507, Percent_Identity=26.6272189349112, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24654424, Length=507, Percent_Identity=26.6272189349112, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19922444, Length=565, Percent_Identity=24.2477876106195, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28573524, Length=526, Percent_Identity=25.6653992395437, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24641187, Length=549, Percent_Identity=23.1329690346084, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24652512, Length=507, Percent_Identity=26.4299802761341, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI19921980, Length=507, Percent_Identity=26.4299802761341, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI161076508, Length=507, Percent_Identity=26.4299802761341, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI221329836, Length=547, Percent_Identity=21.7550274223035, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): 5NTD_VIBVU (Q8DFG4)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_759257.1
- ProteinModelPortal:   Q8DFG4
- SMR:   Q8DFG4
- GeneID:   1177201
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_0248
- HOGENOM:   HBG534106
- OMA:   ECKPDQQ
- ProtClustDB:   PRK09558
- BioCyc:   VVUL216895:VV1_0248-MONOMER
- BRENDA:   3.1.3.5
- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR004843
- Gene3D:   G3DSA:3.90.780.10
- PANTHER:   PTHR11575
- PRINTS:   PR01607

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos; SSF55816 5'-Nucleotdase_C

EC number: =3.1.3.5

Molecular weight: Translated: 61332; Mature: 61332

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00785 5_NUCLEOTIDASE_1; PS00786 5_NUCLEOTIDASE_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: BINDING 432-432

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGM
CCCCEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCCCHHHHCCCCCCH
AARKTLIDELRAEIQAEGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGN
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC
HEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYEMFDKQGIKIAVIGLTTEDTA
CCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL
HCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH
ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVG
HHHCCCCCEEEEECCCCCCCEEECCCHHHHHCCCCCHHCCCCCCCCCEEEEECHHHHHCC
RADYEFRNGELRMVSYDLIPVNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQ
CCCCEEECCEEEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCC
EQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERAKADFAVMNSGGVRDSIEAGE
EEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCCCC
VTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN
EEHHHEEEECCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCEEE
VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPID
EEECCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VNKFAPNGEIVYK
EEEECCCCCEEEC
>Mature Secondary Structure
MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGM
CCCCEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCCCHHHHCCCCCCH
AARKTLIDELRAEIQAEGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGN
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC
HEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYEMFDKQGIKIAVIGLTTEDTA
CCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL
HCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH
ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVG
HHHCCCCCEEEEECCCCCCCEEECCCHHHHHCCCCCHHCCCCCCCCCEEEEECHHHHHCC
RADYEFRNGELRMVSYDLIPVNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQ
CCCCEEECCEEEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCC
EQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERAKADFAVMNSGGVRDSIEAGE
EEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCCCC
VTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN
EEHHHEEEECCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCEEE
VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPID
EEECCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VNKFAPNGEIVYK
EEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA