| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is nutA
Identifier: 326423671
GI number: 326423671
Start: 240949
End: 242610
Strand: Reverse
Name: nutA
Synonym: NA
Alternate gene names: 326423671
Gene position: 242610-240949 (Counterclockwise)
Preceding gene: 27363730
Following gene: 27363728
Centisome position: 7.39
GC content: 48.26
Gene sequence:
>1662_bases ATGAAGCAACGCCTGATTGTAAAAACCGCGCTTAGCGCAGCTATTCTGGCAACTCTGGCGGGTTGTGCAACTCAGCCAAC TCAAGAATGGGCAGCAGATACAACTTACAAACTGACAGTACTGCACACGAACGACCACCACGGCCGTTTCTGGCAAAACA AATACGGTGAGTACGGTATGGCAGCTCGCAAAACTCTGATCGATGAGTTGCGTGCTGAAATCCAAGCGGAAGGCGGCAGC GTACTGCTACTTTCAGGTGGTGATATCAACACAGGTGTTCCTGAGTCAGACCTTCAAGATGCTGAGCCAGATTTCAAAGG CATGAGCAAAATCGGTTACGACGCAATGGCGCTGGGTAACCACGAGTTTGACAATCCTCTAGACGTACTGATGAAGCAGA AAGAGTGGGCTAACTTCCCAATGCTGTCTGCCAACATTTACGACAAGAAAACCGGCGAGCGCATGTTCCAAGCTTACGAG ATGTTCGATAAGCAAGGTATCAAAATTGCGGTTATCGGTCTAACAACCGAAGATACAGCTAAGCTAGGCAACCCAGAATT CATCGGCGCCATTGACTTCCGTGATCCGAAGGAAGAAGCGAAGAAGCTGATTGCTGAGCTAAAAGAAACAGAAAAACCAG ATTTGATCTTCGCCGTGACGCACATGGGTCACTACGAAGATGGTAAGCGTGGCATCAACGCTCCTGGCGATGTGGCACTG GCTCGTTACCTAAACGAAGGTGACCTAGACATGATCGTCGGTGGTCACTCGCAAGAGCCGGTTTGTATGGAAGCACCAAA TGTGGTGAAGAAAAACTTCAAACCAGCAGACGAGTGTAAGCCAGACCAACAAAACGGTACTTACATCGTGCAAGCGCACG AGTGGGGTAAATACGTTGGCCGTGCTGATTACGAGTTCCGCAATGGTGAGCTACGTATGGTGAGCTACGATCTGATTCCG GTTAACCTGAAGAAGAAAGTGGAAGTCGATGGTAAGAGCCAGCGCGTCTTCATTGAAAGCGAAATTAAAGAAGATACTGC ATTGCTAGAGTTCCTACGTCCTTACCAAGAGAAAGGTCAAGAGCAACTTAACGTGAAGATTGCAGACACAAACGGCAAGC TTGAAGGTGACCGTAACGTGGTTCGCTTCCAGCAAACTAACCTAGGTCGTTTGATCGCAGTATCACACATGGAGCGTGCA AAAGCAGACTTCGCAGTAATGAACTCGGGTGGTGTACGTGACTCGATTGAAGCGGGTGAAGTGACTTACAAAGACGTCCT TACCGTTCAGCCTTTTGCAAACATCCTGACTTACACCGATATGACGGGTAAAGAAGTGCTGGACTACCTAAACGTAGTTG CAACGAAACCTGTTGATTCAGGTGCTTACGCGCAATTCGCCGGTATCTCAATGACAGTGGCTAACGGCAAAGTATCGAAC GTATTCATTGGTGGCAAACAGCTTCGTCTAGATGAAACTTACCGCTTCACCGTACCAAGCTACAACGCCGCGGGTGGTGA TGGTTACCCTAAACTGACTGGTCACCCTGGTTACGTGAACACTGGTTTTGTGGATGCTGAAGTACTGAAAGAGTTCCTAG AGAAGAACAGCCCAATCGATGTGAACAAGTTCGCGCCAAATGGTGAGATTGTTTACAAATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: UDP-sugar hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
NA
Sequences:
>Translated_553_residues MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGMAARKTLIDELRAEIQAEGGS VLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGNHEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYE MFDKQGIKIAVIGLTTEDTAKLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVGRADYEFRNGELRMVSYDLIP VNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQEQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERA KADFAVMNSGGVRDSIEAGEVTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPIDVNKFAPNGEIVYK >Mature_553_residues MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGMAARKTLIDELRAEIQAEGGS VLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGNHEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYE MFDKQGIKIAVIGLTTEDTAKLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVGRADYEFRNGELRMVSYDLIP VNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQEQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERA KADFAVMNSGGVRDSIEAGEVTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPIDVNKFAPNGEIVYK
Specific function: Degradation of extracellular 5'-nucleotides for nutritional needs
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family
Homologues:
Organism=Homo sapiens, GI4505467, Length=550, Percent_Identity=23.6363636363636, Blast_Score=106, Evalue=6e-23, Organism=Escherichia coli, GI1786687, Length=549, Percent_Identity=61.0200364298725, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI1790658, Length=490, Percent_Identity=23.265306122449, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI19922446, Length=507, Percent_Identity=26.6272189349112, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24654424, Length=507, Percent_Identity=26.6272189349112, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI19922444, Length=565, Percent_Identity=24.2477876106195, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI28573524, Length=526, Percent_Identity=25.6653992395437, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24641187, Length=549, Percent_Identity=23.1329690346084, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24652512, Length=507, Percent_Identity=26.4299802761341, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI19921980, Length=507, Percent_Identity=26.4299802761341, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI161076508, Length=507, Percent_Identity=26.4299802761341, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI221329836, Length=547, Percent_Identity=21.7550274223035, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): 5NTD_VIBVU (Q8DFG4)
Other databases:
- EMBL: AE016795 - RefSeq: NP_759257.1 - ProteinModelPortal: Q8DFG4 - SMR: Q8DFG4 - GeneID: 1177201 - GenomeReviews: AE016795_GR - KEGG: vvu:VV1_0248 - HOGENOM: HBG534106 - OMA: ECKPDQQ - ProtClustDB: PRK09558 - BioCyc: VVUL216895:VV1_0248-MONOMER - BRENDA: 3.1.3.5 - InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - Gene3D: G3DSA:3.90.780.10 - PANTHER: PTHR11575 - PRINTS: PR01607
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos; SSF55816 5'-Nucleotdase_C
EC number: =3.1.3.5
Molecular weight: Translated: 61332; Mature: 61332
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00785 5_NUCLEOTIDASE_1; PS00786 5_NUCLEOTIDASE_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: BINDING 432-432
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGM CCCCEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCCCHHHHCCCCCCH AARKTLIDELRAEIQAEGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGN HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC HEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYEMFDKQGIKIAVIGLTTEDTA CCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH KLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL HCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVG HHHCCCCCEEEEECCCCCCCEEECCCHHHHHCCCCCHHCCCCCCCCCEEEEECHHHHHCC RADYEFRNGELRMVSYDLIPVNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQ CCCCEEECCEEEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCC EQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERAKADFAVMNSGGVRDSIEAGE EEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCCCC VTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN EEHHHEEEECCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCEEE VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPID EEECCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC VNKFAPNGEIVYK EEEECCCCCEEEC >Mature Secondary Structure MKQRLIVKTALSAAILATLAGCATQPTQEWAADTTYKLTVLHTNDHHGRFWQNKYGEYGM CCCCEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEECCCCCCHHHHCCCCCCH AARKTLIDELRAEIQAEGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGN HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC HEFDNPLDVLMKQKEWANFPMLSANIYDKKTGERMFQAYEMFDKQGIKIAVIGLTTEDTA CCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH KLGNPEFIGAIDFRDPKEEAKKLIAELKETEKPDLIFAVTHMGHYEDGKRGINAPGDVAL HCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH ARYLNEGDLDMIVGGHSQEPVCMEAPNVVKKNFKPADECKPDQQNGTYIVQAHEWGKYVG HHHCCCCCEEEEECCCCCCCEEECCCHHHHHCCCCCHHCCCCCCCCCEEEEECHHHHHCC RADYEFRNGELRMVSYDLIPVNLKKKVEVDGKSQRVFIESEIKEDTALLEFLRPYQEKGQ CCCCEEECCEEEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCC EQLNVKIADTNGKLEGDRNVVRFQQTNLGRLIAVSHMERAKADFAVMNSGGVRDSIEAGE EEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCCCCCCCCCC VTYKDVLTVQPFANILTYTDMTGKEVLDYLNVVATKPVDSGAYAQFAGISMTVANGKVSN EEHHHEEEECCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCEEE VFIGGKQLRLDETYRFTVPSYNAAGGDGYPKLTGHPGYVNTGFVDAEVLKEFLEKNSPID EEECCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC VNKFAPNGEIVYK EEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA