Click here to switch to the map view.

The map label for this gene is padR [H]

Identifier: 326423654

GI number: 326423654

Start: 70130

End: 70645

Strand: Reverse

Name: padR [H]

Synonym: NA

Alternate gene names: 326423654

Gene position: 70645-70130 (Counterclockwise)

Preceding gene: 27363552

Following gene: 27363550

Centisome position: 2.15

GC content: 46.12

Gene sequence:

>516_bases
ATGCACATATCAAATCTGCAACTTGTCTTGATGGCTGAAGTTGGCCAGCAGCAAATGACTGGTTATGACTTAGCAAAACG
TTTACCAGCAAAAGGTTGGAAAGCGTCGCATCAGCAAATTTATCGTGAGCTGGCTAAACTTGAAACATTCGGTTTTTTGT
CTCTGGAAGTGGTTCTGCAATCTGGAAAGCCCGATAAGAAGCTCTATCAGCTAACAGAAATGGGTAAACAGAAACTGACG
GACGCGTTGGATGTTGAGCCTTCCATCTCACGTGTCCAGGATGAAACCTTGGCCCATTTGTTCCTAGCTAACGCGTACTA
TTTTGAGCAGTTGGAAGTTCAACTTACTCAAGCATTGGACAGTGCTCAAGAGCAGCTCGCAGAGAAAATGGCTCAACAGG
AACAACTGTCCGTTCTCGCCATTACTCGAGAGTGTGATCGTTTGAAAACAGAGCTCAGTTGGGTGGCCGTAGTGCTTCAG
AATATCGGCTCGGAGGTTAACTCGAAAGCGGCATAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:
NA

Sequences:

>Translated_171_residues
MHISNLQLVLMAEVGQQQMTGYDLAKRLPAKGWKASHQQIYRELAKLETFGFLSLEVVLQSGKPDKKLYQLTEMGKQKLT
DALDVEPSISRVQDETLAHLFLANAYYFEQLEVQLTQALDSAQEQLAEKMAQQEQLSVLAITRECDRLKTELSWVAVVLQ
NIGSEVNSKAA
>Mature_171_residues
MHISNLQLVLMAEVGQQQMTGYDLAKRLPAKGWKASHQQIYRELAKLETFGFLSLEVVLQSGKPDKKLYQLTEMGKQKLT
DALDVEPSISRVQDETLAHLFLANAYYFEQLEVQLTQALDSAQEQLAEKMAQQEQLSVLAITRECDRLKTELSWVAVVLQ
NIGSEVNSKAA

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 19281; Mature: 19281

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISNLQLVLMAEVGQQQMTGYDLAKRLPAKGWKASHQQIYRELAKLETFGFLSLEVVLQ
CCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
SGKPDKKLYQLTEMGKQKLTDALDVEPSISRVQDETLAHLFLANAYYFEQLEVQLTQALD
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAQEQLAEKMAQQEQLSVLAITRECDRLKTELSWVAVVLQNIGSEVNSKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHISNLQLVLMAEVGQQQMTGYDLAKRLPAKGWKASHQQIYRELAKLETFGFLSLEVVLQ
CCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
SGKPDKKLYQLTEMGKQKLTDALDVEPSISRVQDETLAHLFLANAYYFEQLEVQLTQALD
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAQEQLAEKMAQQEQLSVLAITRECDRLKTELSWVAVVLQNIGSEVNSKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]