| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is thiG
Identifier: 32267350
GI number: 32267350
Start: 1773865
End: 1774656
Strand: Direct
Name: thiG
Synonym: HH1851
Alternate gene names: 32267350
Gene position: 1773865-1774656 (Clockwise)
Preceding gene: 32267349
Following gene: 32267351
Centisome position: 98.59
GC content: 41.92
Gene sequence:
>792_bases ATGAATCATATTAAAGATACTCTCAAAATCGGCTCACATACTTTCGCATCGCGCTTAATTGTCGGGAGCGGAAAATATAA AGACTTTGCTACCACCAAAGAAGCGACTTTAGCAAGTGGCGCAGAAATTATCACCGTTGCAGTTAGGCGTGTGAATATTA TGGATAATAAAAGTGAGAATCTTCTTGAAACCTTTAAAGATACAAATATTCAGTTTTTGCCCAACTCTGCTGGGTGTGTC AATGCTAAGGAAGCAATTACACTCTTTCGTCTTGTGAGAGAAGCAACAGGTATTGATTTTATCAAGCTTGAAATCATAGG CGATATAGACAAAACACTCTATCCTGATGTAATAGAGAGCCTACAAGCCACAGAGATTCTAGCAAATGAGGGCTTTTGCG TATTGGCTTATACAAATGATGACCCTATTATGGCAAAACGACTTGAAAATGCGGGAGCAAGCGCGATTATGCCTCTTGCT GCGCCTATTGGAAGCGGACTTGGAATCCAAAATCGTTATAATATCGGCTTTATCAAAGAAGCAGTAAAAGTGCCTGTGAT TGTTGATGCGGGGGTAGGCTGTGCGAGTGATGCAAGTATCGCTATGGAGTTAGGAGCAGATGCTGTGCTTACAAATACGG CAATTGCTCAAGCACAAAATCCTGTAACGATGGCAGAAGCGATGAAATACGCTGTAAAAGCCGGGCGATTAAGCTATCTT GCTGGACGCATACCACGTAAAGCCTATGCAAGTGCAAGTTCTCCACTTGAAGGTATGATGCAATTTGGTTAG
Upstream 100 bases:
>100_bases CAGCAAGAGAAGCTACAAAACATATTGCAAATTACGCATTGACACCAAGTATGCTTCTTGAAAGCATTACTACCTTGCAA TCTCATAAAAGGATACATAA
Downstream 100 bases:
>100_bases ATTCTAGGCAAAATAATGAAAGATAGAATCTTTAAACAAGATATTGGCAAACAATTTGAATTTGATGCGCAAGTAGCAAG TGTGTTTGATGATATGCTTG
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNHIKDTLKIGSHTFASRLIVGSGKYKDFATTKEATLASGAEIITVAVRRVNIMDNKSENLLETFKDTNIQFLPNSAGCV NAKEAITLFRLVREATGIDFIKLEIIGDIDKTLYPDVIESLQATEILANEGFCVLAYTNDDPIMAKRLENAGASAIMPLA APIGSGLGIQNRYNIGFIKEAVKVPVIVDAGVGCASDASIAMELGADAVLTNTAIAQAQNPVTMAEAMKYAVKAGRLSYL AGRIPRKAYASASSPLEGMMQFG
Sequences:
>Translated_263_residues MNHIKDTLKIGSHTFASRLIVGSGKYKDFATTKEATLASGAEIITVAVRRVNIMDNKSENLLETFKDTNIQFLPNSAGCV NAKEAITLFRLVREATGIDFIKLEIIGDIDKTLYPDVIESLQATEILANEGFCVLAYTNDDPIMAKRLENAGASAIMPLA APIGSGLGIQNRYNIGFIKEAVKVPVIVDAGVGCASDASIAMELGADAVLTNTAIAQAQNPVTMAEAMKYAVKAGRLSYL AGRIPRKAYASASSPLEGMMQFG >Mature_263_residues MNHIKDTLKIGSHTFASRLIVGSGKYKDFATTKEATLASGAEIITVAVRRVNIMDNKSENLLETFKDTNIQFLPNSAGCV NAKEAITLFRLVREATGIDFIKLEIIGDIDKTLYPDVIESLQATEILANEGFCVLAYTNDDPIMAKRLENAGASAIMPLA APIGSGLGIQNRYNIGFIKEAVKVPVIVDAGVGCASDASIAMELGADAVLTNTAIAQAQNPVTMAEAMKYAVKAGRLSYL AGRIPRKAYASASSPLEGMMQFG
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=254, Percent_Identity=44.4881889763779, Blast_Score=213, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_HELHP (Q7VF28)
Other databases:
- EMBL: AE017125 - RefSeq: NP_861382.1 - ProteinModelPortal: Q7VF28 - SMR: Q7VF28 - GeneID: 1492398 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1851 - NMPDR: fig|235279.1.peg.1851 - HOGENOM: HBG296821 - OMA: VAIRRTN - ProtClustDB: PRK00208 - BioCyc: HHEP235279:HH_1851-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 28022; Mature: 28022
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: ACT_SITE 102-102 BINDING 164-164
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHIKDTLKIGSHTFASRLIVGSGKYKDFATTKEATLASGAEIITVAVRRVNIMDNKSEN CCCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHCCCCCCHH LLETFKDTNIQFLPNSAGCVNAKEAITLFRLVREATGIDFIKLEIIGDIDKTLYPDVIES HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH LQATEILANEGFCVLAYTNDDPIMAKRLENAGASAIMPLAAPIGSGLGIQNRYNIGFIKE HHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHH AVKVPVIVDAGVGCASDASIAMELGADAVLTNTAIAQAQNPVTMAEAMKYAVKAGRLSYL HHCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGRIPRKAYASASSPLEGMMQFG HHCCCHHHHHCCCCCHHHHHHCC >Mature Secondary Structure MNHIKDTLKIGSHTFASRLIVGSGKYKDFATTKEATLASGAEIITVAVRRVNIMDNKSEN CCCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHCCCCCCHH LLETFKDTNIQFLPNSAGCVNAKEAITLFRLVREATGIDFIKLEIIGDIDKTLYPDVIES HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH LQATEILANEGFCVLAYTNDDPIMAKRLENAGASAIMPLAAPIGSGLGIQNRYNIGFIKE HHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHH AVKVPVIVDAGVGCASDASIAMELGADAVLTNTAIAQAQNPVTMAEAMKYAVKAGRLSYL HHCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGRIPRKAYASASSPLEGMMQFG HHCCCHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954