| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is 32267335
Identifier: 32267335
GI number: 32267335
Start: 1757518
End: 1759320
Strand: Direct
Name: 32267335
Synonym: HH1836
Alternate gene names: NA
Gene position: 1757518-1759320 (Clockwise)
Preceding gene: 32267334
Following gene: 32267336
Centisome position: 97.69
GC content: 34.39
Gene sequence:
>1803_bases ATGAAACAATTTTTGCCTCTCTTACTTTTTATATTAAGTATCCTTTGTATTTTATGTGTGGGATTCTATCCTCAATTATG TGTGCTTCTTTATGTCGCTTTTATTGGGCAATTTATCGCACTTTTTATGCAAAGCTATGGAATTTTAAAAATAAAAAAAC AAGCCATAATAAAGGCTTATTACAGGCAAGATTCTCTATTGTATCGCTATTTTGGGCGATTTTTATTTGTGAAGGTAACC ACTTTTTTTATTGCTCTTATTGGGAGTGTGCCGCTCTTTTTTATGCTTGTATTTCCTAGCGGTGGAGATATTTTAATTTT TTGTCTCCTTGTGCCTCTTAGCATATATAGCCTAAGAGTGATAAATTTTATTTGTAAAGCCAATATCAGCGCAGATTTTG CTCCCACAATTGCCAAAAAATATACGGCGATTTTTTGCGCACTTTTAGCGTGCATAGGTGAAATGTTCATTCATTCTTAT GGAGATTCAATTTCTCATACGCTTGATATACAATCTCACTATCAAAGTCTTTTGCATAATTATGGTGTCTCCGAAATGAC TTGCCAATGGTGGCAGGAATTTTTTGGTTTTGTGCTTTTAAAAAAAGCTGTGCTTGATGTATTGTATCAAAGCGTAGCAG ATACTTATTTGCATATTGGACTTAATCTGCTTTTTATATGCGGACATTTTGCCTCATTTGCAAGTTTTGCCTTGCTTTGC ATAGGAAACAAATCGTGTAAAGAATCTGCTCCTTTAGGACAAGAGAATCTCCTTTCTTTAAAACAATTTTTTGCAATGCT TTTTTTCTTAATTTTTTTGTATATTGCTTTTAATATCAGCATTCATCTCCAGCCTTTAGCGAAATCCAATAAAGATCTTC CTACGCTTTTAAGCACACAACTTTTATCACATAATAATCAATACATTGAGCTAAGTATCCAAGGAGCACATACTTTTATC CATACCAAAGATTTGCTGTCTTTACATCAAAGATTTGAAGAAAATGTGAATGATTTTCAACAAAGCTTAAACTTCACAAC ACAAGAAAGTATAAATGAATATCTTGCTCAAAAAGAGCGTATTATTGATGAATATTCAAAATGGTATTTTAGTGTGCGTG GCGAATATACAAGGCTTTTTTATGCCGCCATTGGTAAAGGAGAAGACATTGCACAAGAACAATTCCTTTTTTTACTTAAA TCTTATACGCCCTATGATTTGCAAGAGCATTTAAATGGTATATATGACACACATATTGAAAATCTTAAGCTTCGCTTGGA GCAGAGCTTTAGCTTTTTTACAACGCATAAAAAACCTTCTAATGCTACTATTTCCTTTGCCCTTTCATTTAAAGATATAA ATGCACAAATTAGCTCACTCTCTCCTCGTGCTACTGATGGTGTAGCAGCTCTTTTAGGAGCAAGCGTAATAGGAGCGATG ATTCTCAAAACTTCGGGCAAAGCACTTGCCAAATCTACTGCCAAAGCTGTGAGCAAAAGCGTAGCAAAAAAGAGTTTATC AGGAGCAGTAGGAGCAGGAGGCTCAATAGTATGTGGCGTATTTGCACCCTTATGTGCAATTGGATTTTTTGTGGCAAGTG ATTATGCTATAAATAGTGTTGATGAGATGATAAATGAAGATGAGTTTAAACGACAAATGCGTGAGGGATTTGATTTGTGG GAGCTTCAGCTAAAAAACAGCCTCATTAGTTATAATTCGCAACTTTCAAAGCAGATATTAGAAAAGCTTTCATTACAAGG CGATTCTCATATAGAATCCACTCCTATAGAGAATAAAGAATGA
Upstream 100 bases:
>100_bases TGATAAGTCATAATTGTCCTTTATTTAAGCTCAAAGCAATTTCTTTTAGATAGAATCTTTCATCTAAATGTTAAATATAA GGAACTTACTTTTAATAACA
Downstream 100 bases:
>100_bases AAGTGAATAAGAGGAGATAAAGGTGAGAGAGATGAGCATTTGGGTTTTTATAGGTAGCTCATTACTTTTTGCTTGCATAA TTGTTTTAGCAAATTATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILKIKKQAIIKAYYRQDSLLYRYFGRFLFVKVT TFFIALIGSVPLFFMLVFPSGGDILIFCLLVPLSIYSLRVINFICKANISADFAPTIAKKYTAIFCALLACIGEMFIHSY GDSISHTLDIQSHYQSLLHNYGVSEMTCQWWQEFFGFVLLKKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLC IGNKSCKESAPLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQLLSHNNQYIELSIQGAHTFI HTKDLLSLHQRFEENVNDFQQSLNFTTQESINEYLAQKERIIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLK SYTPYDLQEHLNGIYDTHIENLKLRLEQSFSFFTTHKKPSNATISFALSFKDINAQISSLSPRATDGVAALLGASVIGAM ILKTSGKALAKSTAKAVSKSVAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSVDEMINEDEFKRQMREGFDLW ELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE
Sequences:
>Translated_600_residues MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILKIKKQAIIKAYYRQDSLLYRYFGRFLFVKVT TFFIALIGSVPLFFMLVFPSGGDILIFCLLVPLSIYSLRVINFICKANISADFAPTIAKKYTAIFCALLACIGEMFIHSY GDSISHTLDIQSHYQSLLHNYGVSEMTCQWWQEFFGFVLLKKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLC IGNKSCKESAPLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQLLSHNNQYIELSIQGAHTFI HTKDLLSLHQRFEENVNDFQQSLNFTTQESINEYLAQKERIIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLK SYTPYDLQEHLNGIYDTHIENLKLRLEQSFSFFTTHKKPSNATISFALSFKDINAQISSLSPRATDGVAALLGASVIGAM ILKTSGKALAKSTAKAVSKSVAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSVDEMINEDEFKRQMREGFDLW ELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE >Mature_600_residues MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILKIKKQAIIKAYYRQDSLLYRYFGRFLFVKVT TFFIALIGSVPLFFMLVFPSGGDILIFCLLVPLSIYSLRVINFICKANISADFAPTIAKKYTAIFCALLACIGEMFIHSY GDSISHTLDIQSHYQSLLHNYGVSEMTCQWWQEFFGFVLLKKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLC IGNKSCKESAPLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQLLSHNNQYIELSIQGAHTFI HTKDLLSLHQRFEENVNDFQQSLNFTTQESINEYLAQKERIIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLK SYTPYDLQEHLNGIYDTHIENLKLRLEQSFSFFTTHKKPSNATISFALSFKDINAQISSLSPRATDGVAALLGASVIGAM ILKTSGKALAKSTAKAVSKSVAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSVDEMINEDEFKRQMREGFDLW ELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67642; Mature: 67642
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILKIKKQAIIKAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YRQDSLLYRYFGRFLFVKVTTFFIALIGSVPLFFMLVFPSGGDILIFCLLVPLSIYSLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH INFICKANISADFAPTIAKKYTAIFCALLACIGEMFIHSYGDSISHTLDIQSHYQSLLHN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YGVSEMTCQWWQEFFGFVLLKKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGNKSCKESAPLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCHHHHHHH LLSHNNQYIELSIQGAHTFIHTKDLLSLHQRFEENVNDFQQSLNFTTQESINEYLAQKER HHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLKSYTPYDLQEHLNGIYDTHIE HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHH NLKLRLEQSFSFFTTHKKPSNATISFALSFKDINAQISSLSPRATDGVAALLGASVIGAM HHHHHHHHCHHHHCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ILKTSGKALAKSTAKAVSKSVAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSV HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH DEMINEDEFKRQMREGFDLWELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILKIKKQAIIKAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YRQDSLLYRYFGRFLFVKVTTFFIALIGSVPLFFMLVFPSGGDILIFCLLVPLSIYSLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH INFICKANISADFAPTIAKKYTAIFCALLACIGEMFIHSYGDSISHTLDIQSHYQSLLHN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YGVSEMTCQWWQEFFGFVLLKKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGNKSCKESAPLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCHHHHHHH LLSHNNQYIELSIQGAHTFIHTKDLLSLHQRFEENVNDFQQSLNFTTQESINEYLAQKER HHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLKSYTPYDLQEHLNGIYDTHIE HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHH NLKLRLEQSFSFFTTHKKPSNATISFALSFKDINAQISSLSPRATDGVAALLGASVIGAM HHHHHHHHCHHHHCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ILKTSGKALAKSTAKAVSKSVAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSV HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH DEMINEDEFKRQMREGFDLWELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA