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The map label for this gene is rsmI [H]

Identifier: 32267244

GI number: 32267244

Start: 1670970

End: 1671830

Strand: Direct

Name: rsmI [H]

Synonym: HH1745

Alternate gene names: 32267244

Gene position: 1670970-1671830 (Clockwise)

Preceding gene: 161546620

Following gene: 32267245

Centisome position: 92.88

GC content: 35.08

Gene sequence:

>861_bases
GTGCTAATACTTGTGTCAACTCCCATAGGGAATCTTGAAGATATTACTCTGCGGGCGTTAGAGGCATTTAAACAAGCCGA
TATTATTTTATGCGAAGATACAAGAGTTGCAAAAAAACTCTTAGAACTTCTTATCTCTCGTTCTTTACTTCAGATACCTA
CTGATATGGATTGTCAGTCTTTTATAGAATCTAAACAATTTAAATCTTTTCATTCTCATAATCAAGAGGAATTTATAGAT
TCTTTACATAAGGAAATGTTTGCATCTTGTGTGCTTTATTTGAGTGATGCTGGCACACCTTGTATTAGCGACCCGGGCGC
GAAACTTATCTCTTATGCAATAACACACGATATTGACTTTGATGTGTTGCCCGGAGCTTGTGCGCTTAATGTGGCATTTT
GTGGTAGCGGTATAGAATCTACACCTTTTGTATTTGCAGGATTTTTACCACATAAAAAGACTCATAGGCATTCTAAACTG
ATACAGCTCTCCCATTTAGATATGGGAGATTCTTATAGTGTTATTTGTTATGAAAGCCCTCATAGAATCTTAGAAACTTT
ACACGATATTGCTTTACTTCTTCCTCATATACGAATTATTGTGCAAAAAGAACTCACTAAGCTCCATCAGCAGAGATATT
ATGGTAGTGCACAAGAAGTGATTGCCATACTCAAAGATGTTACGATTCGGGGCGAATGGGTGATTATATTTGATTTTAGC
TCTTCTCACATAAAACAAGAGAAAACTTTAAGTTATGAGGATATTTTTATACTTGATATTCCACCAAAGATTAAAGCTAA
AATCTTAAGCAAAATAAGCGGACATAGCATTAAGCAATGTTATGAAGAAATACTAAGGTGA

Upstream 100 bases:

>100_bases
TCAAGCTTTTGTCATCCTTTTTATACAGGAAGTGATAAAATCACAGATATTACAGGACGTGTTGAGAAATTCCGACAAAA
ATATAATATGAAATAATCCT

Downstream 100 bases:

>100_bases
ATCAGTGATAGTTTATGGAAAACAACCCATTTTGTATATTTTACACACAAATGCTTCGTGCATTGAAGAAATATATCTTG
CTAAAGAGTTACCAAAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLILVSTPIGNLEDITLRALEAFKQADIILCEDTRVAKKLLELLISRSLLQIPTDMDCQSFIESKQFKSFHSHNQEEFID
SLHKEMFASCVLYLSDAGTPCISDPGAKLISYAITHDIDFDVLPGACALNVAFCGSGIESTPFVFAGFLPHKKTHRHSKL
IQLSHLDMGDSYSVICYESPHRILETLHDIALLLPHIRIIVQKELTKLHQQRYYGSAQEVIAILKDVTIRGEWVIIFDFS
SSHIKQEKTLSYEDIFILDIPPKIKAKILSKISGHSIKQCYEEILR

Sequences:

>Translated_286_residues
MLILVSTPIGNLEDITLRALEAFKQADIILCEDTRVAKKLLELLISRSLLQIPTDMDCQSFIESKQFKSFHSHNQEEFID
SLHKEMFASCVLYLSDAGTPCISDPGAKLISYAITHDIDFDVLPGACALNVAFCGSGIESTPFVFAGFLPHKKTHRHSKL
IQLSHLDMGDSYSVICYESPHRILETLHDIALLLPHIRIIVQKELTKLHQQRYYGSAQEVIAILKDVTIRGEWVIIFDFS
SSHIKQEKTLSYEDIFILDIPPKIKAKILSKISGHSIKQCYEEILR
>Mature_286_residues
MLILVSTPIGNLEDITLRALEAFKQADIILCEDTRVAKKLLELLISRSLLQIPTDMDCQSFIESKQFKSFHSHNQEEFID
SLHKEMFASCVLYLSDAGTPCISDPGAKLISYAITHDIDFDVLPGACALNVAFCGSGIESTPFVFAGFLPHKKTHRHSKL
IQLSHLDMGDSYSVICYESPHRILETLHDIALLLPHIRIIVQKELTKLHQQRYYGSAQEVIAILKDVTIRGEWVIIFDFS
SSHIKQEKTLSYEDIFILDIPPKIKAKILSKISGHSIKQCYEEILR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=261, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32381; Mature: 32381

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILVSTPIGNLEDITLRALEAFKQADIILCEDTRVAKKLLELLISRSLLQIPTDMDCQS
CEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHH
FIESKQFKSFHSHNQEEFIDSLHKEMFASCVLYLSDAGTPCISDPGAKLISYAITHDIDF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
DVLPGACALNVAFCGSGIESTPFVFAGFLPHKKTHRHSKLIQLSHLDMGDSYSVICYESP
CCCCCHHHEEHHHHCCCCCCCCEEEEECCCCCHHHHHHHHEEEEECCCCCCEEEEEECCH
HRILETLHDIALLLPHIRIIVQKELTKLHQQRYYGSAQEVIAILKDVTIRGEWVIIFDFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEECCCEEEEEECC
SSHIKQEKTLSYEDIFILDIPPKIKAKILSKISGHSIKQCYEEILR
CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHC
>Mature Secondary Structure
MLILVSTPIGNLEDITLRALEAFKQADIILCEDTRVAKKLLELLISRSLLQIPTDMDCQS
CEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHH
FIESKQFKSFHSHNQEEFIDSLHKEMFASCVLYLSDAGTPCISDPGAKLISYAITHDIDF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
DVLPGACALNVAFCGSGIESTPFVFAGFLPHKKTHRHSKLIQLSHLDMGDSYSVICYESP
CCCCCHHHEEHHHHCCCCCCCCEEEEECCCCCHHHHHHHHEEEEECCCCCCEEEEEECCH
HRILETLHDIALLLPHIRIIVQKELTKLHQQRYYGSAQEVIAILKDVTIRGEWVIIFDFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEECCCEEEEEECC
SSHIKQEKTLSYEDIFILDIPPKIKAKILSKISGHSIKQCYEEILR
CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]