| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267121
Identifier: 32267121
GI number: 32267121
Start: 1544420
End: 1545514
Strand: Direct
Name: 32267121
Synonym: HH1622
Alternate gene names: NA
Gene position: 1544420-1545514 (Clockwise)
Preceding gene: 32267120
Following gene: 32267122
Centisome position: 85.84
GC content: 32.05
Gene sequence:
>1095_bases ATGAAAATGTGGAAAATTATTTGTTATATTTTATTGATGGGTTTATGTTTGAATGCGCTAGCAGATACGACTAAACCCAA GATTGCTTATATAAATGTGAGTTTTCCAAGTGCAGATACAGGCTTGTATGTTGGGCAAGATATAGAAGTAAAATATAGCC TTACTTTACTTTCTGGTGCAAAGCTTGCTTCTGCTGAGTTTATAGACCTTTCTGCAAAGAATAATGTAGAGTTGAGAAAT AAAGGTGCAAGTTGGCAGCAAGGCATAGATGGTGTATTAGTTAATACATACATATATAAAATTATGGGTAAAGATGTTAC ACTCCCACCTTTGCGTATTAAGGCGATTTCAAATGATAAGAGCTATGAAGAGGAAATCATTGCTAATGGAGCAAAATTAC AAGCTATTGAGCTTTCTCATAATGCTTCTTATGTAAATGTCATTGCTGATGCAATGGAAGTAGTTGATTATCGTGTAAAA GAATATGATGAAGCTAACAACATTATTATATTCCAGATTGAAAGCAAAGGGGCAAATCTAAATACGATGAGATTTACTCA ATATCAAAAACAAGGCTTGGAGAGTAGTAAGGTTGTTGATGGTGTAACTTATGGCATTTATTATGTAGTGCTTGATAAAT CTATTCGCAGTCTTTCATTTGATTATTTTAATCTTACACAAAAACAGTTTGTAAATATCACATTGCCGATTAATCTTACA CGCAATATTATTGATGAGAGCGGAGATATTAAGCCACGCAATACGTTTTTGATATTTAAGAATCTCTTAGTGGGTGGATT GATTATTTTTGTTGGAATTATTTGGGTTGTATTTAAAAAAGGACGCAAAATAACACTAAGTATTCTTGTTTTACTTGTGC TCGTATTACTATATAATATATTTTTTAGTGCAGTTTCAGGTATAGCACAAGCTGGAGCAAATATTAGTATTATTCCTACG CATAATTCTACAATTACGGAAGTAGTCAAAACACCCATAGAAGTAGCAATTATTGGCGAATATGGAGATTATTATAAAGT AATGATAGAAAATCGTGTAGGTTGGATAAGGAAAGAATATGTTAGCAAAAATTAG
Upstream 100 bases:
>100_bases CCCCGAAAGAGCTATTGAAGATATGCTTGGCAGCTGTGATGGCAAAGCAATGCTTGATAATCTTTTGCATATTGCAGAGA TGAAATAAGAGGTGAGAATA
Downstream 100 bases:
>100_bases AGCATTTCTTGCCACTCTCTCCATCGCCATTTATCTTCCCGTCATTATTGCCCAAATCTATCTTACGCGTAGTTGGCGTA ATGGTAGATGGGCAAGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKMWKIICYILLMGLCLNALADTTKPKIAYINVSFPSADTGLYVGQDIEVKYSLTLLSGAKLASAEFIDLSAKNNVELRN KGASWQQGIDGVLVNTYIYKIMGKDVTLPPLRIKAISNDKSYEEEIIANGAKLQAIELSHNASYVNVIADAMEVVDYRVK EYDEANNIIIFQIESKGANLNTMRFTQYQKQGLESSKVVDGVTYGIYYVVLDKSIRSLSFDYFNLTQKQFVNITLPINLT RNIIDESGDIKPRNTFLIFKNLLVGGLIIFVGIIWVVFKKGRKITLSILVLLVLVLLYNIFFSAVSGIAQAGANISIIPT HNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEYVSKN
Sequences:
>Translated_364_residues MKMWKIICYILLMGLCLNALADTTKPKIAYINVSFPSADTGLYVGQDIEVKYSLTLLSGAKLASAEFIDLSAKNNVELRN KGASWQQGIDGVLVNTYIYKIMGKDVTLPPLRIKAISNDKSYEEEIIANGAKLQAIELSHNASYVNVIADAMEVVDYRVK EYDEANNIIIFQIESKGANLNTMRFTQYQKQGLESSKVVDGVTYGIYYVVLDKSIRSLSFDYFNLTQKQFVNITLPINLT RNIIDESGDIKPRNTFLIFKNLLVGGLIIFVGIIWVVFKKGRKITLSILVLLVLVLLYNIFFSAVSGIAQAGANISIIPT HNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEYVSKN >Mature_364_residues MKMWKIICYILLMGLCLNALADTTKPKIAYINVSFPSADTGLYVGQDIEVKYSLTLLSGAKLASAEFIDLSAKNNVELRN KGASWQQGIDGVLVNTYIYKIMGKDVTLPPLRIKAISNDKSYEEEIIANGAKLQAIELSHNASYVNVIADAMEVVDYRVK EYDEANNIIIFQIESKGANLNTMRFTQYQKQGLESSKVVDGVTYGIYYVVLDKSIRSLSFDYFNLTQKQFVNITLPINLT RNIIDESGDIKPRNTFLIFKNLLVGGLIIFVGIIWVVFKKGRKITLSILVLLVLVLLYNIFFSAVSGIAQAGANISIIPT HNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEYVSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40776; Mature: 40776
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMWKIICYILLMGLCLNALADTTKPKIAYINVSFPSADTGLYVGQDIEVKYSLTLLSGA CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEEEEECCC KLASAEFIDLSAKNNVELRNKGASWQQGIDGVLVNTYIYKIMGKDVTLPPLRIKAISNDK CCCCCEEEEECCCCCEEEECCCCCHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCC SYEEEIIANGAKLQAIELSHNASYVNVIADAMEVVDYRVKEYDEANNIIIFQIESKGANL CHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC NTMRFTQYQKQGLESSKVVDGVTYGIYYVVLDKSIRSLSFDYFNLTQKQFVNITLPINLT CEEEEHHHHHCCCCCHHHHHHHHHEEEEEEEECHHHHCCCHHHCCCCCCEEEEEEEEEEH RNIIDESGDIKPRNTFLIFKNLLVGGLIIFVGIIWVVFKKGRKITLSILVLLVLVLLYNI HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHH FFSAVSGIAQAGANISIIPTHNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEY HHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEEECCCCEEEEEEECCCHHHHHHH VSKN CCCC >Mature Secondary Structure MKMWKIICYILLMGLCLNALADTTKPKIAYINVSFPSADTGLYVGQDIEVKYSLTLLSGA CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEEEEECCC KLASAEFIDLSAKNNVELRNKGASWQQGIDGVLVNTYIYKIMGKDVTLPPLRIKAISNDK CCCCCEEEEECCCCCEEEECCCCCHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCC SYEEEIIANGAKLQAIELSHNASYVNVIADAMEVVDYRVKEYDEANNIIIFQIESKGANL CHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC NTMRFTQYQKQGLESSKVVDGVTYGIYYVVLDKSIRSLSFDYFNLTQKQFVNITLPINLT CEEEEHHHHHCCCCCHHHHHHHHHEEEEEEEECHHHHCCCHHHCCCCCCEEEEEEEEEEH RNIIDESGDIKPRNTFLIFKNLLVGGLIIFVGIIWVVFKKGRKITLSILVLLVLVLLYNI HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHH FFSAVSGIAQAGANISIIPTHNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEY HHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEEECCCCEEEEEEECCCHHHHHHH VSKN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA