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The map label for this gene is flgC

Identifier: 32266907

GI number: 32266907

Start: 1347308

End: 1347799

Strand: Direct

Name: flgC

Synonym: HH1408

Alternate gene names: 32266907

Gene position: 1347308-1347799 (Clockwise)

Preceding gene: 32266906

Following gene: 32266908

Centisome position: 74.89

GC content: 38.41

Gene sequence:

>492_bases
ATGTTTCTCTCAAGTTTTGATATTAGCGGTTATGGGCTTTCAGCGCAAAGAGTGCGTATTAATACGATTTCATCAAATAT
TGCCAATGCAAACACTACACGCACCGATGAGGGTGGTCCATATCGCAGAAGAGAAGTGATATTTCGTGCATTTGATTTTA
ATAAAGTATTAAATGAAAAATTGGGCAAAAATAACCAGCAATTACGATATGAAGACCCATTAAATGAAGGCGATTTGGGA
AAAGAACCAAAACCTGCTATAATGAGCGTTTATATTCCAAAAATCGTGCGTGATGACAGGGAGCCGCTTATGAAATATGA
CCCAAGCCACCCAGATGCGAATTCTGAAGGTTATGTCGCTTATCCTAATGTTAATCCCGTTGTTGAAATGGCCGATTTAA
TAGAAGCAACTCGTGCATATCAAGCAAATGTTGCAGCATTTCAAAGTGCAAAGAATATGGCGAGCAATGCAATTACAATG
TTTCAAGCATAG

Upstream 100 bases:

>100_bases
AATGTATCAAGCTCTCACAAGTGCTTTGAAGAGGCATAAGGGTATTTTTGCTTATGCTATGGATTCAGGTAGAAATATCT
AAAATAATTAAGGAGCAAAT

Downstream 100 bases:

>100_bases
GAGAAATAGATGTCTAATAAATTTGGTGTGATTACAAACGATATTCAACCTATTGGCACGAACAATAAGAATGTAGAAAA
TATAAAAAATCGGCAAGATG

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEKLGKNNQQLRYEDPLNEGDLG
KEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITM
FQA

Sequences:

>Translated_163_residues
MFLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEKLGKNNQQLRYEDPLNEGDLG
KEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITM
FQA
>Mature_163_residues
MFLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEKLGKNNQQLRYEDPLNEGDLG
KEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITM
FQA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=161, Percent_Identity=29.8136645962733, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 18286; Mature: 18286

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEK
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGKNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVA
HCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEE
YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC
>Mature Secondary Structure
MFLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEK
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGKNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVA
HCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEE
YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]