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The map label for this gene is rpmC

Identifier: 32266885

GI number: 32266885

Start: 1334408

End: 1334596

Strand: Direct

Name: rpmC

Synonym: HH1386

Alternate gene names: 32266885

Gene position: 1334408-1334596 (Clockwise)

Preceding gene: 32266884

Following gene: 32266886

Centisome position: 74.17

GC content: 32.28

Gene sequence:

>189_bases
ATGAAATTTATTGATTTGAAAGACAAGGACATTGCAGAATTGCAAAAAATGTTGAAGGAAAAAAAATCGTTGCTTTTTGA
AAAAAGATTGCAGCTAAAGACAATGCAGCTTACTAATCCAAGCGAAATTAAGGTTATTCGCAAGGATATTGCAAGAATCA
ATACAGCCTTAAGTGCAAAGAAGGATTAG

Upstream 100 bases:

>100_bases
GAGATGGCAGGGATTGATGAAGCTTTGGCGAGAGAGGCTTTAGCTTTAGCTCAAAGTAAGCTTCCTTTTAAAACTAAAAT
CATAACCAGCGAGAGTGAAA

Downstream 100 bases:

>100_bases
AATATGAGTGAAAAACAAGCGCATACAAGAGTAATTCAAGGTAAAGTCATCAGTCAAGCGGGAAATAAAAGTATAGTAAT
TTTGGTAGAGCGGAAAGTTG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MKFIDLKDKDIAELQKMLKEKKSLLFEKRLQLKTMQLTNPSEIKVIRKDIARINTALSAKKD

Sequences:

>Translated_62_residues
MKFIDLKDKDIAELQKMLKEKKSLLFEKRLQLKTMQLTNPSEIKVIRKDIARINTALSAKKD
>Mature_62_residues
MKFIDLKDKDIAELQKMLKEKKSLLFEKRLQLKTMQLTNPSEIKVIRKDIARINTALSAKKD

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_HELHP (Q7VGD6)

Other databases:

- EMBL:   AE017125
- RefSeq:   NP_860917.1
- ProteinModelPortal:   Q7VGD6
- SMR:   Q7VGD6
- GeneID:   1493074
- GenomeReviews:   AE017125_GR
- KEGG:   hhe:HH1386
- NMPDR:   fig|235279.1.peg.1386
- HOGENOM:   HBG730819
- OMA:   NTAINAY
- ProtClustDB:   PRK00306
- BioCyc:   HHEP235279:HH_1386-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7288; Mature: 7288

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIDLKDKDIAELQKMLKEKKSLLFEKRLQLKTMQLTNPSEIKVIRKDIARINTALSAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
KD
CC
>Mature Secondary Structure
MKFIDLKDKDIAELQKMLKEKKSLLFEKRLQLKTMQLTNPSEIKVIRKDIARINTALSAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954