| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266764
Identifier: 32266764
GI number: 32266764
Start: 1225207
End: 1225971
Strand: Direct
Name: 32266764
Synonym: HH1265
Alternate gene names: NA
Gene position: 1225207-1225971 (Clockwise)
Preceding gene: 32266763
Following gene: 32266765
Centisome position: 68.1
GC content: 38.69
Gene sequence:
>765_bases ATGCACAAAATATTGCATTATTTTCGTTCTACACAACGGGCTTTTTCGCTTTTTGAGGTAGTAGTGAGCATTGTTATTTT GGGCGTGATTGGTATAATATGCAGTTCTATGCTATTGCATATGAGCAAAAATCTCACCTATACTCGTAGTTTGAATGACC CAAATGCGCATATAATCCTCGCAAAAATTGAGAATCTACTACAATATGCGATTATAGAATCTCTCATTGGAGATGGCGGA GTGCCACTTAGCGTAGCAAGTTCATCTCTTATGTTTGCAGCCATTGATGAGCAATCTCTTCTTGGGGGTGGATACAAAAA TGCTCCATCACCTATGCAAGGAGATACGCTCCTGCCTCTAGTGTCTATAAATATACAATCTCATCACGATACTTCTTTAT ACTTTACAACCTTGAGAGGATGGCAGCTCCAGCAGCAACTCTATCTTGTTACACAGCCTAAAGAAATATTCACTCCCTAT ACTATTACACGCATTCACACACAAACTCTTGTGCTTGATAAAGCACCACAGCATACCCCTTATCTTGCCTTGCCAATACA ATCGCACTCTATTGAACTGCGAGATAATATATTGTGGCTTGATAAAGCACCTCTTGCTTTTGATGTGCTTTCTTTTAGTA TTAAACCACTATCTTTTTCTCAAGGCATTTTTATTGAATTACATCTTTGTGTTGCGACATCATTAAAAGAGCATTGTGAA AGCGGGGGTGTGTGGCTTGATGAAATTGTAGAGAATATGTTGTGA
Upstream 100 bases:
>100_bases ATTCTACACCACTGCTTACCTATGAACTTTTAGAACATAGTTATAGCATTCCTGATAATTTTGAATTTTTAAGATTTTAT ATGCCCAAAGCTATTCACTG
Downstream 100 bases:
>100_bases AAAAGTCTAAACAATCATCACAAAAGGTATCCAAGATTGCTTATAAACGTAAAGGATTCTATATGATATATGCTATATTA ATCATCGTCTCCGTAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MHKILHYFRSTQRAFSLFEVVVSIVILGVIGIICSSMLLHMSKNLTYTRSLNDPNAHIILAKIENLLQYAIIESLIGDGG VPLSVASSSLMFAAIDEQSLLGGGYKNAPSPMQGDTLLPLVSINIQSHHDTSLYFTTLRGWQLQQQLYLVTQPKEIFTPY TITRIHTQTLVLDKAPQHTPYLALPIQSHSIELRDNILWLDKAPLAFDVLSFSIKPLSFSQGIFIELHLCVATSLKEHCE SGGVWLDEIVENML
Sequences:
>Translated_254_residues MHKILHYFRSTQRAFSLFEVVVSIVILGVIGIICSSMLLHMSKNLTYTRSLNDPNAHIILAKIENLLQYAIIESLIGDGG VPLSVASSSLMFAAIDEQSLLGGGYKNAPSPMQGDTLLPLVSINIQSHHDTSLYFTTLRGWQLQQQLYLVTQPKEIFTPY TITRIHTQTLVLDKAPQHTPYLALPIQSHSIELRDNILWLDKAPLAFDVLSFSIKPLSFSQGIFIELHLCVATSLKEHCE SGGVWLDEIVENML >Mature_254_residues MHKILHYFRSTQRAFSLFEVVVSIVILGVIGIICSSMLLHMSKNLTYTRSLNDPNAHIILAKIENLLQYAIIESLIGDGG VPLSVASSSLMFAAIDEQSLLGGGYKNAPSPMQGDTLLPLVSINIQSHHDTSLYFTTLRGWQLQQQLYLVTQPKEIFTPY TITRIHTQTLVLDKAPQHTPYLALPIQSHSIELRDNILWLDKAPLAFDVLSFSIKPLSFSQGIFIELHLCVATSLKEHCE SGGVWLDEIVENML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28369; Mature: 28369
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKILHYFRSTQRAFSLFEVVVSIVILGVIGIICSSMLLHMSKNLTYTRSLNDPNAHIIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEH AKIENLLQYAIIESLIGDGGVPLSVASSSLMFAAIDEQSLLGGGYKNAPSPMQGDTLLPL HHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCEEEEE VSINIQSHHDTSLYFTTLRGWQLQQQLYLVTQPKEIFTPYTITRIHTQTLVLDKAPQHTP EEEEEECCCCCEEEEEEECCCEEEEEEEEEECCHHHHCCEEEEEEEEEEEEEECCCCCCC YLALPIQSHSIELRDNILWLDKAPLAFDVLSFSIKPLSFSQGIFIELHLCVATSLKEHCE EEEEEECCCCEEECCCEEEEECCCCEEEHHHHEECCCCCCCCEEEEEHHHHHHHHHHHHH SGGVWLDEIVENML CCCEEHHHHHHHCC >Mature Secondary Structure MHKILHYFRSTQRAFSLFEVVVSIVILGVIGIICSSMLLHMSKNLTYTRSLNDPNAHIIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEH AKIENLLQYAIIESLIGDGGVPLSVASSSLMFAAIDEQSLLGGGYKNAPSPMQGDTLLPL HHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCEEEEE VSINIQSHHDTSLYFTTLRGWQLQQQLYLVTQPKEIFTPYTITRIHTQTLVLDKAPQHTP EEEEEECCCCCEEEEEEECCCEEEEEEEEEECCHHHHCCEEEEEEEEEEEEEECCCCCCC YLALPIQSHSIELRDNILWLDKAPLAFDVLSFSIKPLSFSQGIFIELHLCVATSLKEHCE EEEEEECCCCEEECCCEEEEECCCCEEEHHHHEECCCCCCCCEEEEEHHHHHHHHHHHHH SGGVWLDEIVENML CCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA