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The map label for this gene is fixN

Identifier: 32266755

GI number: 32266755

Start: 1219927

End: 1221390

Strand: Direct

Name: fixN

Synonym: HH1256

Alternate gene names: 32266755

Gene position: 1219927-1221390 (Clockwise)

Preceding gene: 32266754

Following gene: 32266756

Centisome position: 67.81

GC content: 37.09

Gene sequence:

>1464_bases
ATGCAGACAAATACACTCGAGTATGATTACTCAATTGCTAAGTTATTTGTTTTCTCTGCGATGGCTTTTGGATTTGTAGG
ACTACTCATCGGGGTAGTTATTGCATTTCAAATGGCATTCCCAGATTTAAACTATCTAGCTTCAGAATATGGAACTTTTG
GTAGGCTTCGACCACTTCATACCAATGGTATTATTTATGGTTTTACATTGAGCGGAATTTGGGCTTCGTGGTATTACTTA
GGACAAAGAGTGCTTAAGATTACATACAAAGAGCACTGCTTTTTACGTGCAGTTGGTTTAGCACATTTTTGGATTTATAT
TGTGCTGATGGCTCTTGCAGTAATTACACTTTTTGCTGGATTAACACAATCAAAAGAATATTCTGAACTTATTTGGCCTC
TTGATATTCTTGTAGTTGTTGTGTGGGTATTATGGGGTGTAAGCCTTTTTGGAAGTATGGGTGTAAGACGTGAGCAGACA
ATTTATATTTCATTGTGGTATTTCATTGCTACTTTTGTAGGAATTTCTGCTCTTTATATCTTTAATAATCTTGCAGTTCC
AACTTATTTTATCGCAGGTGTAGGAAGTATCTTACATTCAATTTCATTTTATGCAGGAACAAATGATGCGATGGTGCAAT
GGTGGTGGGGGCATAATGCCGTTGCATTCGTCTTTACTTCAGGTATTATTGGGTTAATCTATTACTTTTTACCTAAAGAA
TCTGGGCAACCTATCTTCTCATATAAACTTACTTTGTTCTCATTCTGGGGACTTATGTTTATCTATATTTGGGCAGGTGG
ACATCACTTAATTTACTCAACCACACCTGATTGGATTCAGACACTTGGTTCTGTGTTTTCAGTTATTTTGATTTTGCCTT
CGTGGGGGACAGCTATTAATATGCTTTTAACAATGCGTGGGCAATGGCATCAAATTAAAGAATCTCCAATGATAAAATTC
CTCATCCTTGCTTCAACTTGGTATATGCTTACTACGCTAGAAGGACCAATTCAGTCTATTCGTTCAGTCAATGGCTTGGC
TCACTTTACAGATTGGATTATTGGACATGTTCATGATGCGGCACTTGGTTGGGTAGGATTTATGATTATCGCAGCGTGCT
TCCATATGGTGCCTCGCATATTTAAGCGTGAGCTTTATTCTAAAAAACTTATGGACGCACAATTCTGGATTATGACGACA
GGGATTATCCTTTACTTTTCAAGTATGTGGATTGCAGGTATTACACAGGGTATGATGTGGAGAGATGTTGATGATAATGG
AAACCTTACATATAGTTTTATCCATACAGTTGTTTCACTTTTCCCTTATTATCTTATCCGTGCAATTGGTGGTTTGATGT
ATTTGGCAGGTTTTATAATGTTTATTTATAATATTCTTATGACAATTTCATCAGGCAGGGTGCTTGAAAAAGAACCCCAA
AATGCTACTCCGATGGCGGCGTAA

Upstream 100 bases:

>100_bases
CTTTGTTGTTTTTTTATTAACTTTTTAAGGCAGCTATAACTTCAAAGGCACTATAATCAAATTTGTATTTTAATAACTTT
CAAAGGACAAGGAGACTGCA

Downstream 100 bases:

>100_bases
AGGAGGAATGAGAATATGTTTAGTTTTTTAGAGAGAAATCCATTCTTTTTCACGGTTGCATTTTTATTGGTATTTTCTAT
TGCAGGGTTAGTAGAAGTTT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MQTNTLEYDYSIAKLFVFSAMAFGFVGLLIGVVIAFQMAFPDLNYLASEYGTFGRLRPLHTNGIIYGFTLSGIWASWYYL
GQRVLKITYKEHCFLRAVGLAHFWIYIVLMALAVITLFAGLTQSKEYSELIWPLDILVVVVWVLWGVSLFGSMGVRREQT
IYISLWYFIATFVGISALYIFNNLAVPTYFIAGVGSILHSISFYAGTNDAMVQWWWGHNAVAFVFTSGIIGLIYYFLPKE
SGQPIFSYKLTLFSFWGLMFIYIWAGGHHLIYSTTPDWIQTLGSVFSVILILPSWGTAINMLLTMRGQWHQIKESPMIKF
LILASTWYMLTTLEGPIQSIRSVNGLAHFTDWIIGHVHDAALGWVGFMIIAACFHMVPRIFKRELYSKKLMDAQFWIMTT
GIILYFSSMWIAGITQGMMWRDVDDNGNLTYSFIHTVVSLFPYYLIRAIGGLMYLAGFIMFIYNILMTISSGRVLEKEPQ
NATPMAA

Sequences:

>Translated_487_residues
MQTNTLEYDYSIAKLFVFSAMAFGFVGLLIGVVIAFQMAFPDLNYLASEYGTFGRLRPLHTNGIIYGFTLSGIWASWYYL
GQRVLKITYKEHCFLRAVGLAHFWIYIVLMALAVITLFAGLTQSKEYSELIWPLDILVVVVWVLWGVSLFGSMGVRREQT
IYISLWYFIATFVGISALYIFNNLAVPTYFIAGVGSILHSISFYAGTNDAMVQWWWGHNAVAFVFTSGIIGLIYYFLPKE
SGQPIFSYKLTLFSFWGLMFIYIWAGGHHLIYSTTPDWIQTLGSVFSVILILPSWGTAINMLLTMRGQWHQIKESPMIKF
LILASTWYMLTTLEGPIQSIRSVNGLAHFTDWIIGHVHDAALGWVGFMIIAACFHMVPRIFKRELYSKKLMDAQFWIMTT
GIILYFSSMWIAGITQGMMWRDVDDNGNLTYSFIHTVVSLFPYYLIRAIGGLMYLAGFIMFIYNILMTISSGRVLEKEPQ
NATPMAA
>Mature_487_residues
MQTNTLEYDYSIAKLFVFSAMAFGFVGLLIGVVIAFQMAFPDLNYLASEYGTFGRLRPLHTNGIIYGFTLSGIWASWYYL
GQRVLKITYKEHCFLRAVGLAHFWIYIVLMALAVITLFAGLTQSKEYSELIWPLDILVVVVWVLWGVSLFGSMGVRREQT
IYISLWYFIATFVGISALYIFNNLAVPTYFIAGVGSILHSISFYAGTNDAMVQWWWGHNAVAFVFTSGIIGLIYYFLPKE
SGQPIFSYKLTLFSFWGLMFIYIWAGGHHLIYSTTPDWIQTLGSVFSVILILPSWGTAINMLLTMRGQWHQIKESPMIKF
LILASTWYMLTTLEGPIQSIRSVNGLAHFTDWIIGHVHDAALGWVGFMIIAACFHMVPRIFKRELYSKKLMDAQFWIMTT
GIILYFSSMWIAGITQGMMWRDVDDNGNLTYSFIHTVVSLFPYYLIRAIGGLMYLAGFIMFIYNILMTISSGRVLEKEPQ
NATPMAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 55494; Mature: 55494

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]