| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266553
Identifier: 32266553
GI number: 32266553
Start: 1029866
End: 1030384
Strand: Direct
Name: 32266553
Synonym: HH1054
Alternate gene names: NA
Gene position: 1029866-1030384 (Clockwise)
Preceding gene: 32266551
Following gene: 32266556
Centisome position: 57.24
GC content: 43.35
Gene sequence:
>519_bases ATGCCACGCCCTACCAACAAAAGCGATTTGCTTGCCTTAAGTCAGAAAAATTATGAATCTCTGCTTGCGTTGATAGAGCA AATCCCGCTTGAACAACAAAGCACACCCTTTGAATATAACGAGCGAGATAAGGCTTTGCGCGATGTGCTTGTGCATTTGT ATGAATGGCAGATACTTTTGCTTCGCTTTGTGCGCACAAACCTTGAGAGGACGAGTGATTTTGTGCCTTTTCTCCCTGCG CCTTATAGTTTCAAAACCTATCCCGCGATGAATAGGGAGATTTGGCAAAAGCACCAAAGCACGCCATTAGAGAACGCAAA GGCAATGTTAGGAAAAAGCCACATAGAATGTATGGAGCTGATAGAGACTCTCCCACAAAAGGAACTTTTTGTCAAAAAGC ACTACAAGTGGTGCGGCAACACAAGTCTTGGGAGCTATTGTGTGAGTGCGACTTCAAGCCATTATGATTGGGCAAGTAAA TGTATAAAAAAGCGTGTGAGGAGCTTGAAAAAGGTTTAA
Upstream 100 bases:
>100_bases AATATACCCCAAAATCCACTTTGATGTGATAGAGCATTGCACGCTTGAAAATTAAGTCTTAGAATCTTATAATGCCTTGA GATTTGTTCAAAGGACACCT
Downstream 100 bases:
>100_bases GAATGCTTAAACCGCAAATCCTCATCAAGTGTATGAGCGAGAGTATCCATTAAGCGTAGCAAACCACACGATGAGTGGCA ACAATGCGTAAGCAAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPRPTNKSDLLALSQKNYESLLALIEQIPLEQQSTPFEYNERDKALRDVLVHLYEWQILLLRFVRTNLERTSDFVPFLPA PYSFKTYPAMNREIWQKHQSTPLENAKAMLGKSHIECMELIETLPQKELFVKKHYKWCGNTSLGSYCVSATSSHYDWASK CIKKRVRSLKKV
Sequences:
>Translated_172_residues MPRPTNKSDLLALSQKNYESLLALIEQIPLEQQSTPFEYNERDKALRDVLVHLYEWQILLLRFVRTNLERTSDFVPFLPA PYSFKTYPAMNREIWQKHQSTPLENAKAMLGKSHIECMELIETLPQKELFVKKHYKWCGNTSLGSYCVSATSSHYDWASK CIKKRVRSLKKV >Mature_171_residues PRPTNKSDLLALSQKNYESLLALIEQIPLEQQSTPFEYNERDKALRDVLVHLYEWQILLLRFVRTNLERTSDFVPFLPAP YSFKTYPAMNREIWQKHQSTPLENAKAMLGKSHIECMELIETLPQKELFVKKHYKWCGNTSLGSYCVSATSSHYDWASKC IKKRVRSLKKV
Specific function: Unknown
COG id: COG4283
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20182; Mature: 20050
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPTNKSDLLALSQKNYESLLALIEQIPLEQQSTPFEYNERDKALRDVLVHLYEWQILL CCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRFVRTNLERTSDFVPFLPAPYSFKTYPAMNREIWQKHQSTPLENAKAMLGKSHIECMEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IETLPQKELFVKKHYKWCGNTSLGSYCVSATSSHYDWASKCIKKRVRSLKKV HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRPTNKSDLLALSQKNYESLLALIEQIPLEQQSTPFEYNERDKALRDVLVHLYEWQILL CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRFVRTNLERTSDFVPFLPAPYSFKTYPAMNREIWQKHQSTPLENAKAMLGKSHIECMEL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IETLPQKELFVKKHYKWCGNTSLGSYCVSATSSHYDWASKCIKKRVRSLKKV HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA