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The map label for this gene is ykpA [H]

Identifier: 32266413

GI number: 32266413

Start: 887587

End: 889197

Strand: Direct

Name: ykpA [H]

Synonym: HH0914

Alternate gene names: 32266413

Gene position: 887587-889197 (Clockwise)

Preceding gene: 32266409

Following gene: 32266417

Centisome position: 49.33

GC content: 38.73

Gene sequence:

>1611_bases
ATGCTTCAAACTATCAATCTTTCAATGCGCTATGCAACAAAAAAGCTTTTTGAAAATGTCAATATCAAACTTGACGCACA
TAAAAGATATGGGCTTATTGGCGCAAATGGTGCAGGTAAATCCACATTACTTAAGATTCTTTCGGGCATATACGAAGCGA
GCAGTGGAGAGGTTGTGATTGAAAAGGGTTTAAAAATGGGCGTATTAGGGCAAGACCAATATGCTTTTGAAGAGCTAAGC
TTAAAAGATGCTGTGCTTATCGGCAATCAACGCCTTTATGAAGCAATCAAGCGCAAAGAATATCTTTATGAAAATGGTGA
TTTAAGCGATGAGAAAGTCAATGAAGAGCTCGGCGAGTTAGAGATGATATGTGCCGAAGAAGACCCTATGTATGAATGCG
ATGTAATAATAGAAAAAATTTTAGAGGATTTGGGCTTTGAAAGTGCTATGCATAATGAGCTGATGAAAACACTTACAGGG
GGCGATAAATTTAAGATCCTCCTCGCACAAGTGCTTTTCCCAAAACCAGATATTTTACTCCTTGATGAGCCGACAAACAA
CCTTGATTTACATTCCATTGCGTGGCTTGAGGAGAATCTAAAGCGACACGAGGGCACACTTGTTGTTATTAGCCACGATA
GACATTTTTTAAACAGCGTTTGCACGCATATTTTAGATATGGATTTTGGCTCTGTGCGTGAATTTAGCGGTAATTATGAT
GATTGGTATATTGCAAGCACCCTTATTGCCAAACAACAAGAAGCTGAACGCAATAAAAAACTCAAAGAAAAAGAGGAATT
AGAATCTTTCATTGCACGATTCTCTGCGAATGCAAGTAAGGCAAAACAAGCTACAAGCCGACAAAAACAGCTTGAAAAGC
TTAATATTCAAACTCTAGCAGTAAGCTCAAGGCGAGACCCGAGCATTGTTTTTAAACCAAATCGCCCTATTGGCAACGAA
GCCCTAGAATGTGAAAATATCTCTAAAAACTATGGGGAGCTTTGCGTATTAAAAAATGTCAGCCTTAAGATTTTGCCCGG
TGATAAAATTGCTATTATTGGCGCAAATGGCGTGGGTAAAAGCACATTATGTAAGATTCTCATAGAGGAACTCAAAGCAG
ATAGTGGCATAATCAAATGGGGTGCAACCACGCAAAGAGGCTATTTCCCACAAAATGTAAGTGAGGAGATAAAAGGAGAG
GAAAGCCTTTATGAATGGCTTAGAGGTTTTGATAAGAAAAAAGAAAGCGGCGAGATACGCAATGCACTTGGAAGAATGCT
CTTTAGTGGAGAAGAGCAAGAAAAGCCCATAAATGCACTAAGTGGTGGAGAGAAGCATAGAATGGTGCTAAGCAAATTAA
TGCTTGAAGGAGGAAATTTCTTAGTGCTTGATGAGCCGACAAATCACTTAGATTTAGAATCCATTATTGCGCTTGGCGAG
GCACTCTATAAATTTAGCGGGAATGTCATTTGCGTAAGCCACGATAGAGAACTCATTGACGCATATGCAAATAGAATCAT
AGAACTTGTAACAGATTCTGAAAATAAAGGAGCTAAGATTATTGATTTTCGTGGCAGTTATGAGGAATACATAGAGGGAG
AAAAAAAATAA

Upstream 100 bases:

>100_bases
TTATAAAGTGTTTTAACTTAAAATCACTCTAACTTTTATCTTATAAAATCTAGTGTAAAATCATTTTTCAAAATTAATCC
AAAGTTTTAAAGGGAATTTT

Downstream 100 bases:

>100_bases
TGTTTCCATTGTCTTTTGCTGTTATGAAAACTACATAAAATACTTAAGTGTGCTCTAATAAGGGTGGTGAGCCTATACAT
AATCAGATTTGTTAGTGATT

Product: ABC transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MLQTINLSMRYATKKLFENVNIKLDAHKRYGLIGANGAGKSTLLKILSGIYEASSGEVVIEKGLKMGVLGQDQYAFEELS
LKDAVLIGNQRLYEAIKRKEYLYENGDLSDEKVNEELGELEMICAEEDPMYECDVIIEKILEDLGFESAMHNELMKTLTG
GDKFKILLAQVLFPKPDILLLDEPTNNLDLHSIAWLEENLKRHEGTLVVISHDRHFLNSVCTHILDMDFGSVREFSGNYD
DWYIASTLIAKQQEAERNKKLKEKEELESFIARFSANASKAKQATSRQKQLEKLNIQTLAVSSRRDPSIVFKPNRPIGNE
ALECENISKNYGELCVLKNVSLKILPGDKIAIIGANGVGKSTLCKILIEELKADSGIIKWGATTQRGYFPQNVSEEIKGE
ESLYEWLRGFDKKKESGEIRNALGRMLFSGEEQEKPINALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLESIIALGE
ALYKFSGNVICVSHDRELIDAYANRIIELVTDSENKGAKIIDFRGSYEEYIEGEKK

Sequences:

>Translated_536_residues
MLQTINLSMRYATKKLFENVNIKLDAHKRYGLIGANGAGKSTLLKILSGIYEASSGEVVIEKGLKMGVLGQDQYAFEELS
LKDAVLIGNQRLYEAIKRKEYLYENGDLSDEKVNEELGELEMICAEEDPMYECDVIIEKILEDLGFESAMHNELMKTLTG
GDKFKILLAQVLFPKPDILLLDEPTNNLDLHSIAWLEENLKRHEGTLVVISHDRHFLNSVCTHILDMDFGSVREFSGNYD
DWYIASTLIAKQQEAERNKKLKEKEELESFIARFSANASKAKQATSRQKQLEKLNIQTLAVSSRRDPSIVFKPNRPIGNE
ALECENISKNYGELCVLKNVSLKILPGDKIAIIGANGVGKSTLCKILIEELKADSGIIKWGATTQRGYFPQNVSEEIKGE
ESLYEWLRGFDKKKESGEIRNALGRMLFSGEEQEKPINALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLESIIALGE
ALYKFSGNVICVSHDRELIDAYANRIIELVTDSENKGAKIIDFRGSYEEYIEGEKK
>Mature_536_residues
MLQTINLSMRYATKKLFENVNIKLDAHKRYGLIGANGAGKSTLLKILSGIYEASSGEVVIEKGLKMGVLGQDQYAFEELS
LKDAVLIGNQRLYEAIKRKEYLYENGDLSDEKVNEELGELEMICAEEDPMYECDVIIEKILEDLGFESAMHNELMKTLTG
GDKFKILLAQVLFPKPDILLLDEPTNNLDLHSIAWLEENLKRHEGTLVVISHDRHFLNSVCTHILDMDFGSVREFSGNYD
DWYIASTLIAKQQEAERNKKLKEKEELESFIARFSANASKAKQATSRQKQLEKLNIQTLAVSSRRDPSIVFKPNRPIGNE
ALECENISKNYGELCVLKNVSLKILPGDKIAIIGANGVGKSTLCKILIEELKADSGIIKWGATTQRGYFPQNVSEEIKGE
ESLYEWLRGFDKKKESGEIRNALGRMLFSGEEQEKPINALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLESIIALGE
ALYKFSGNVICVSHDRELIDAYANRIIELVTDSENKGAKIIDFRGSYEEYIEGEKK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=33.3984375, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=33.3984375, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI148612853, Length=504, Percent_Identity=32.7380952380952, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI69354671, Length=517, Percent_Identity=31.9148936170213, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI10947135, Length=518, Percent_Identity=31.8532818532818, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI47078218, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI45446740, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1787041, Length=532, Percent_Identity=42.1052631578947, Blast_Score=453, Evalue=1e-128,
Organism=Escherichia coli, GI1789751, Length=532, Percent_Identity=33.2706766917293, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI2367384, Length=534, Percent_Identity=34.0823970037453, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=31.9926873857404, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI1788165, Length=189, Percent_Identity=32.2751322751323, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1787105, Length=217, Percent_Identity=29.4930875576037, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=24.4725738396624, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790162, Length=272, Percent_Identity=24.6323529411765, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48995001, Length=207, Percent_Identity=28.9855072463768, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=25.8333333333333, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787112, Length=226, Percent_Identity=26.1061946902655, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=33.2096474953618, Blast_Score=254, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17555318, Length=543, Percent_Identity=32.0441988950276, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17559834, Length=559, Percent_Identity=30.5903398926655, Blast_Score=219, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=34.5794392523364, Blast_Score=247, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6321121, Length=515, Percent_Identity=32.8155339805825, Blast_Score=237, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6325030, Length=418, Percent_Identity=26.3157894736842, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=421, Percent_Identity=23.7529691211401, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=421, Percent_Identity=25.41567695962, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6321752, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=246, Percent_Identity=27.2357723577236, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24642252, Length=548, Percent_Identity=32.6642335766423, Blast_Score=262, Evalue=4e-70,
Organism=Drosophila melanogaster, GI18859989, Length=548, Percent_Identity=32.6642335766423, Blast_Score=262, Evalue=4e-70,
Organism=Drosophila melanogaster, GI24666836, Length=501, Percent_Identity=33.9321357285429, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI24641342, Length=518, Percent_Identity=30.6949806949807, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI28574150, Length=214, Percent_Identity=24.7663551401869, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007328, Length=214, Percent_Identity=24.7663551401869, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60329; Mature: 60329

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTINLSMRYATKKLFENVNIKLDAHKRYGLIGANGAGKSTLLKILSGIYEASSGEVVI
CCEEEEHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
EKGLKMGVLGQDQYAFEELSLKDAVLIGNQRLYEAIKRKEYLYENGDLSDEKVNEELGEL
ECCCCCCCCCCCHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCE
EMICAEEDPMYECDVIIEKILEDLGFESAMHNELMKTLTGGDKFKILLAQVLFPKPDILL
EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEE
LDEPTNNLDLHSIAWLEENLKRHEGTLVVISHDRHFLNSVCTHILDMDFGSVREFSGNYD
EECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCC
DWYIASTLIAKQQEAERNKKLKEKEELESFIARFSANASKAKQATSRQKQLEKLNIQTLA
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEE
VSSRRDPSIVFKPNRPIGNEALECENISKNYGELCVLKNVSLKILPGDKIAIIGANGVGK
ECCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCEEEEECCCEEEEEECCCCCH
STLCKILIEELKADSGIIKWGATTQRGYFPQNVSEEIKGEESLYEWLRGFDKKKESGEIR
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHH
NALGRMLFSGEEQEKPINALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLESIIALGE
HHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
ALYKFSGNVICVSHDRELIDAYANRIIELVTDSENKGAKIIDFRGSYEEYIEGEKK
HHHHHCCCEEEEECCHHHHHHHHHHHEEHHCCCCCCCCEEEEECCCHHHHCCCCCC
>Mature Secondary Structure
MLQTINLSMRYATKKLFENVNIKLDAHKRYGLIGANGAGKSTLLKILSGIYEASSGEVVI
CCEEEEHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
EKGLKMGVLGQDQYAFEELSLKDAVLIGNQRLYEAIKRKEYLYENGDLSDEKVNEELGEL
ECCCCCCCCCCCHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCE
EMICAEEDPMYECDVIIEKILEDLGFESAMHNELMKTLTGGDKFKILLAQVLFPKPDILL
EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEE
LDEPTNNLDLHSIAWLEENLKRHEGTLVVISHDRHFLNSVCTHILDMDFGSVREFSGNYD
EECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCC
DWYIASTLIAKQQEAERNKKLKEKEELESFIARFSANASKAKQATSRQKQLEKLNIQTLA
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEE
VSSRRDPSIVFKPNRPIGNEALECENISKNYGELCVLKNVSLKILPGDKIAIIGANGVGK
ECCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCEEEEECCCEEEEEECCCCCH
STLCKILIEELKADSGIIKWGATTQRGYFPQNVSEEIKGEESLYEWLRGFDKKKESGEIR
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHH
NALGRMLFSGEEQEKPINALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLESIIALGE
HHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
ALYKFSGNVICVSHDRELIDAYANRIIELVTDSENKGAKIIDFRGSYEEYIEGEKK
HHHHHCCCEEEEECCHHHHHHHHHHHEEHHCCCCCCCCEEEEECCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]