| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266356
Identifier: 32266356
GI number: 32266356
Start: 836061
End: 837422
Strand: Direct
Name: 32266356
Synonym: HH0857
Alternate gene names: NA
Gene position: 836061-837422 (Clockwise)
Preceding gene: 32266353
Following gene: 32266357
Centisome position: 46.47
GC content: 35.76
Gene sequence:
>1362_bases ATGGAAAATAAAAAGGAGAGTAAAGAACTTACACCTCAAGAAAAACGCAATAAAGAATTATATGATGTGCTTTCTAGCTG TCTGGACGCACCAAAAGAGGAATTAGAATCTTTAAAAGCAAAAGCCCTTGCACTTATTGAAAAAGGTGCGGTGATAGATA AAGAAAAAATCAGCGAGCTAGAAGCTTATGTCAGCGATTTAGAGCAGGAGTATTGGGACGATAGAGCAGTGTATGCAGGA CGCAGTGTCAAAGACAGCGAGGAATATAAGCTTTTGCAAGTTTTAAAAAAGTTTCACAAAGCAAAAGACAAGGCAAAGGC ATTTGATTCACTCTTTATGCCTGTTACAAAATCTAAGGGTGTAACTCATCAGCCACAAAATAAGGCAGAGCTTAAAAAAC TCGTAAAAGATAAAAAGATTTACTTAGGTGATATTGATGTAACTTGCGTAAAAGACTTTACAAATTTATTTGAAAACAGC AGGAGAAAGGATTTTAGTGGGATAGAAACTTGGGATGTAAGCCACGTTACTACAACGAGAAGATGTTTTTGCGGTGCAAA GCATTTCAATGAAAATATAGAATCTTGGAATGTCTCAAAGGTAAAAAATATGTGCCAAATGTTTATGGATGCAGAGAATT TTAATCAGCCCTTAAACAAATGGAATACTTCAAGTGTTACGAATATGAGCGAAATGTTTGCTTACGCCACTAGCTTTAAT CAACCCCTTGATAAATGGAATGTCTCAAATGTGGATAATATAGAATATATGTTTTATGGGGCAAAATCTTTCAATCAAAA TCTTAATACTTGGAAGCTGCCTAAAGTGAATTGGAATCATTATAGGTTGTATCAAGTGGGTAAGATTTTTCTAGATTCTG CTTTAGATGAAAATCCACCAAAGTGGTTTGTAGCCGCTATGGATAGCAAAAAATGCAATGGCAAGTATCAGCCAAAGATA GACAGAGATATTTGGTATCTCCTCAAAGATAAAAAGGTCGCTTTTAGCGATATAGATGTGAGCTTGATGACAAGTATGTT TCAGCTTTTTGATGACACTTATGTTCCAAGTGTCGCAGCAAGCATAAAAGACTTTAGCGGGATAGAGACTTGGGATGTAA GCAATGTTACGGATATGAGCGGTATGTTTCGTAATGCAAAAAATTTTAATATCGACATAAGCGGCTGGAATGTCTCTAAT GTAAAAAGTATGTCTATGATGTTTTATGGGGCAGAAAACTTCAATCAAAATCTTGATAAATGGCAGGTGAGAAGCGATTG CAATGTGAAGTATATGTTTGAGGGAACACCTTTAGAAGAGAATCCGCCCAAGTGGTATAAGAAAATAGCAGATAAGAACT AA
Upstream 100 bases:
>100_bases TACAATTTATTATGATTGAATATACAATCTTGCATTTACAAAAAAAAAAAAAACGATATAATGCGCGGACACAAAGGATT TGTCATAGGAGGAAAGAATA
Downstream 100 bases:
>100_bases GTAAATCCCTTTGCAAAAAGTGGGTTTAGCCCATCAAAGGAAAAATACGCGTTTTATTATGGCAAATGATATGAGAATCT GCCAATGTCATTTACTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein PARCEL Family; PARCEL Domain Protein; Membrane-Associated Lipoprotein; Transmembrane Protein; Membrane-Associated Lipoprotein Precurser; Variable Surface Protein; Membrane Associated Lipoprotein; Prolipoprotein Q; Prolipoprotein; LPXTG-Motif Cell Wall Anchor Domain Protein; Cell Surface Protein; Prolipoprotein C; Variable Surface Prolipoprotein; Adhesin-Like Protein; Surface Located Membrane Protein
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MENKKESKELTPQEKRNKELYDVLSSCLDAPKEELESLKAKALALIEKGAVIDKEKISELEAYVSDLEQEYWDDRAVYAG RSVKDSEEYKLLQVLKKFHKAKDKAKAFDSLFMPVTKSKGVTHQPQNKAELKKLVKDKKIYLGDIDVTCVKDFTNLFENS RRKDFSGIETWDVSHVTTTRRCFCGAKHFNENIESWNVSKVKNMCQMFMDAENFNQPLNKWNTSSVTNMSEMFAYATSFN QPLDKWNVSNVDNIEYMFYGAKSFNQNLNTWKLPKVNWNHYRLYQVGKIFLDSALDENPPKWFVAAMDSKKCNGKYQPKI DRDIWYLLKDKKVAFSDIDVSLMTSMFQLFDDTYVPSVAASIKDFSGIETWDVSNVTDMSGMFRNAKNFNIDISGWNVSN VKSMSMMFYGAENFNQNLDKWQVRSDCNVKYMFEGTPLEENPPKWYKKIADKN
Sequences:
>Translated_453_residues MENKKESKELTPQEKRNKELYDVLSSCLDAPKEELESLKAKALALIEKGAVIDKEKISELEAYVSDLEQEYWDDRAVYAG RSVKDSEEYKLLQVLKKFHKAKDKAKAFDSLFMPVTKSKGVTHQPQNKAELKKLVKDKKIYLGDIDVTCVKDFTNLFENS RRKDFSGIETWDVSHVTTTRRCFCGAKHFNENIESWNVSKVKNMCQMFMDAENFNQPLNKWNTSSVTNMSEMFAYATSFN QPLDKWNVSNVDNIEYMFYGAKSFNQNLNTWKLPKVNWNHYRLYQVGKIFLDSALDENPPKWFVAAMDSKKCNGKYQPKI DRDIWYLLKDKKVAFSDIDVSLMTSMFQLFDDTYVPSVAASIKDFSGIETWDVSNVTDMSGMFRNAKNFNIDISGWNVSN VKSMSMMFYGAENFNQNLDKWQVRSDCNVKYMFEGTPLEENPPKWYKKIADKN >Mature_453_residues MENKKESKELTPQEKRNKELYDVLSSCLDAPKEELESLKAKALALIEKGAVIDKEKISELEAYVSDLEQEYWDDRAVYAG RSVKDSEEYKLLQVLKKFHKAKDKAKAFDSLFMPVTKSKGVTHQPQNKAELKKLVKDKKIYLGDIDVTCVKDFTNLFENS RRKDFSGIETWDVSHVTTTRRCFCGAKHFNENIESWNVSKVKNMCQMFMDAENFNQPLNKWNTSSVTNMSEMFAYATSFN QPLDKWNVSNVDNIEYMFYGAKSFNQNLNTWKLPKVNWNHYRLYQVGKIFLDSALDENPPKWFVAAMDSKKCNGKYQPKI DRDIWYLLKDKKVAFSDIDVSLMTSMFQLFDDTYVPSVAASIKDFSGIETWDVSNVTDMSGMFRNAKNFNIDISGWNVSN VKSMSMMFYGAENFNQNLDKWQVRSDCNVKYMFEGTPLEENPPKWYKKIADKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52681; Mature: 52681
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKKESKELTPQEKRNKELYDVLSSCLDAPKEELESLKAKALALIEKGAVIDKEKISEL CCCCCHHHCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EAYVSDLEQEYWDDRAVYAGRSVKDSEEYKLLQVLKKFHKAKDKAKAFDSLFMPVTKSKG HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC VTHQPQNKAELKKLVKDKKIYLGDIDVTCVKDFTNLFENSRRKDFSGIETWDVSHVTTTR CCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH RCFCGAKHFNENIESWNVSKVKNMCQMFMDAENFNQPLNKWNTSSVTNMSEMFAYATSFN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC QPLDKWNVSNVDNIEYMFYGAKSFNQNLNTWKLPKVNWNHYRLYQVGKIFLDSALDENPP CCHHHCCCCCCCCEEEEEEECHHHCCCCCCEECCCCCCCCEEHHHHHHHHHHHHCCCCCC KWFVAAMDSKKCNGKYQPKIDRDIWYLLKDKKVAFSDIDVSLMTSMFQLFDDTYVPSVAA CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEHHCCHHHHHHHHHHHCCCCHHHHHH SIKDFSGIETWDVSNVTDMSGMFRNAKNFNIDISGWNVSNVKSMSMMFYGAENFNQNLDK HHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHEEECCHHHCCCCHH WQVRSDCNVKYMFEGTPLEENPPKWYKKIADKN EECCCCCCEEEEECCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MENKKESKELTPQEKRNKELYDVLSSCLDAPKEELESLKAKALALIEKGAVIDKEKISEL CCCCCHHHCCCCHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EAYVSDLEQEYWDDRAVYAGRSVKDSEEYKLLQVLKKFHKAKDKAKAFDSLFMPVTKSKG HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC VTHQPQNKAELKKLVKDKKIYLGDIDVTCVKDFTNLFENSRRKDFSGIETWDVSHVTTTR CCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH RCFCGAKHFNENIESWNVSKVKNMCQMFMDAENFNQPLNKWNTSSVTNMSEMFAYATSFN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC QPLDKWNVSNVDNIEYMFYGAKSFNQNLNTWKLPKVNWNHYRLYQVGKIFLDSALDENPP CCHHHCCCCCCCCEEEEEEECHHHCCCCCCEECCCCCCCCEEHHHHHHHHHHHHCCCCCC KWFVAAMDSKKCNGKYQPKIDRDIWYLLKDKKVAFSDIDVSLMTSMFQLFDDTYVPSVAA CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEHHCCHHHHHHHHHHHCCCCHHHHHH SIKDFSGIETWDVSNVTDMSGMFRNAKNFNIDISGWNVSNVKSMSMMFYGAENFNQNLDK HHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHEEECCHHHCCCCHH WQVRSDCNVKYMFEGTPLEENPPKWYKKIADKN EECCCCCCEEEEECCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA