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The map label for this gene is hypA

Identifier: 32266307

GI number: 32266307

Start: 787130

End: 787555

Strand: Direct

Name: hypA

Synonym: HH0808

Alternate gene names: 32266307

Gene position: 787130-787555 (Clockwise)

Preceding gene: 32266301

Following gene: 32266308

Centisome position: 43.75

GC content: 39.67

Gene sequence:

>426_bases
GTGATTTTTTGTTTATTTTATCACTTCTTGGGTAAAATTCAACCTACAACTTTACATACAAGGACAAAAATGCACGAATA
TTCTATTGTCGCCTCACTGATACAAATGTGCGAATCCCACGCAAAAGAGCATAATGCTGCCTCTATTGCCAAAGTCTGCA
TCGCCGTTGGTGAGCGTAGTGGTGTAGATAGTGCGCTTGTAAAAAGTGCATTTGAGACTTTTAGACTTGATTCACCTTTG
TGTCAAAATACTATTTTGGAAATACAATCCCAAAGCGTTGAACTAGAGTGTCGCGACTGCGGGCATTATTTTCAAGCACA
AAATCTCACATATAGCACTTGTCCGCAGTGTCAAAGTCATAATGTCATCATCGCTAAGGGCAAAGAGCTGCATCTCCTTA
GCCTTGAGCTTGATATACAATCTTAA

Upstream 100 bases:

>100_bases
AAAAGTCATACTTTGCACACTAATAGGTGCATCACCGCCTACTGCCACATTTCCTACAAAAATTTGTTTTGTTTTTACCC
TTTGCACTCCAAATCCCTTT

Downstream 100 bases:

>100_bases
AAAGGAGCATATATGCCTAAAATTGATAAACCTCTTGCTCAAAAAGTAGATGAACGCGTATTTGAGCAGCTTTTAAAATA
CAATCCTCAAACGCAAAATC

Product: hydrogenase nickel incorporation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIFCLFYHFLGKIQPTTLHTRTKMHEYSIVASLIQMCESHAKEHNAASIAKVCIAVGERSGVDSALVKSAFETFRLDSPL
CQNTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSHNVIIAKGKELHLLSLELDIQS

Sequences:

>Translated_141_residues
MIFCLFYHFLGKIQPTTLHTRTKMHEYSIVASLIQMCESHAKEHNAASIAKVCIAVGERSGVDSALVKSAFETFRLDSPL
CQNTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSHNVIIAKGKELHLLSLELDIQS
>Mature_141_residues
MIFCLFYHFLGKIQPTTLHTRTKMHEYSIVASLIQMCESHAKEHNAASIAKVCIAVGERSGVDSALVKSAFETFRLDSPL
CQNTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSHNVIIAKGKELHLLSLELDIQS

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 15832; Mature: 15832

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFCLFYHFLGKIQPTTLHTRTKMHEYSIVASLIQMCESHAKEHNAASIAKVCIAVGERS
CCHHEEHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
GVDSALVKSAFETFRLDSPLCQNTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCC
NVIIAKGKELHLLSLELDIQS
CEEEECCCEEEEEEEEEEECC
>Mature Secondary Structure
MIFCLFYHFLGKIQPTTLHTRTKMHEYSIVASLIQMCESHAKEHNAASIAKVCIAVGERS
CCHHEEHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
GVDSALVKSAFETFRLDSPLCQNTILEIQSQSVELECRDCGHYFQAQNLTYSTCPQCQSH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCC
NVIIAKGKELHLLSLELDIQS
CEEEECCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]