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The map label for this gene is fliD

Identifier: 32266289

GI number: 32266289

Start: 766121

End: 768169

Strand: Direct

Name: fliD

Synonym: HH0790

Alternate gene names: 32266289

Gene position: 766121-768169 (Clockwise)

Preceding gene: 32266288

Following gene: 32266290

Centisome position: 42.58

GC content: 35.29

Gene sequence:

>2049_bases
ATGGCACTTGGAACATTGAGTTCGCTTGGACTTGGAAGTAAAGTTTTAAATCACGATGTGATTGATAAACTAAGAGAAGC
TGATGAGGCTTCACTTATCAAGCCTATTGATAAAAAAATTGAACAAAATGTTGAAAAGCAAACAGAGCTTGTAGCTATTA
CTTCTACTTTGCGTGATTTAAAATCTAGCACGAGTAAGCTTGGAGATTATTCTACCTATTTAGGGCGCTCAAGTAATGTA
ATTGGCGATGCACTCAAAGCAAATATATCAGCAGGTGTGCCAACACAAGATATTAAAATTGATATAGATTCTGTGGCGAC
TTCAGATATTAATGAAATAGGCTCAAAATATGAGAGTAGAGAATCTGTATTTAGCCAAAAAGATTCTGTATTAAAATTTC
ATCACAAAGGGCACGACTATAAAATTGATATTAAAGCGGGTATGCAATTAGGTGAAGTAGCGCAACTCATTACAGATACA
ACAAAAGGTGAAGTAATGGGAATTGTTATGAAAACAGGTGGCTCAAACCCTTACCAGCTTATGATTAATTCAAAAGATAC
AGGCGAATCTTCACGAATATATTTTGGTTCAACTACAAGCGGCTCTGTCGTGCCCTCTGGTGCTTTTTCTGTGAATGATG
GAGATTTAAACATTACACTTAAAGACAAAAAAGGTATTGACAAAACCCTTTCTATCAAACTTCCTAAAACTGCAATAGAA
TCTAAAAGCCAAGATAACGCCGAGGCTCTCAAAGAAGCTATCATTACTGCAATTAAAAATGATTCAGATTTTGATGGACT
GCTTGATAATGATATTAATATCGGTATAGGTGGTGCAAATAGTGATACACTCACTCTTAATGATAGACGTGGTTATAGTA
TTGAACTTCAAGGCTCAAAAGCCCAAAGTTTAGGTTTTGGCACAGAAAATAAAAATAATGCCAAAGAAGATTTAATGGTG
GCAACTAAAAGTGTAGGAGCAGGAAAGCTTACAGGTACAATCAATATAGGCAGTATCCCACTTGACCTTTCTACACTCAC
AAAAGAAAAAAATACATCTGCCCAAAATGCAAAAAATATCGCTGAAGCCATTAATAATATTGCGGGTATTTATGGTTCTG
TCAATGATGAGGGCAAGCTTGTGATTAACTCTGATACGGGAGAAGTAAATATTTATGCCAACGACGACCCTGCAAGTAAA
AAAGCCCTTGAGGATTTGGGATTAAAAGCTGGCACAACAATGGATTATGCCAAAACACAAGAAGAGCTTTTTAAAATACG
TAAAGTTCAAAAAGCAGAAGATGCAAAATTCTCATACAATGGAATTTCAATGAAACGCCCTACAAATAATGTTGATGACA
TTGTAAGTGGAGTAAATATTGAGTTTCTTACTACTACTGAACCGGGCAAACCTGCAGTAATTAGCATTACACGTAATGAT
GAAGAAATTATAGAAAATGTGAAAAAATTTGTTGAATCTTATAATGATCTTGCTTTAAAACTTGATGATGTTACACGTTA
TGATGAAGATTCTAAAATTGCTGGCGTATTCAATGGCAATAGTGATATTCGTATGATACGTCCTAGCCTTAATCGTATAT
TTTCTACAACGATCCAAACAGAAACAGAGCTAAAAGGACTTGCTAAATATGGACTTACTCTTAACGAAAAAGGCACAATG
ACACTTGATGTGAGCAAACTCCAAATGGCTTTGAGCTCTGACCCAGAAGGCACACAAGAGCTTTTTAATGGAAGTCTTAA
AACAACAGAATTTAAAGAAGTGCAAACCGATGGTGTCTTTAAAAAATTTGACCAAGAGATTGATAGACTCTTAAATGGAC
CAAATGCAAGACTTAAAGTCCTTGAGGAAAGCCTCACAAAAGATGATAAAAAATTGCGTGAGGACAGAAAAAAAGCAGTT
GAGCAACTCAATATACGCTATGACATTATGGCACAGAGATTTGCGGCTTATGATTCTCAAATCTCTAAAACCAATAATGC
CTTTAGCAGTGTTCAATTGATGATTGACCAATCTGTAGCTAAAAAATAA

Upstream 100 bases:

>100_bases
ATGAAAAAAATGCGTGAAGTCATTGGTGTTATTTTTGACAAACAAGGTTAATCTTTGAAGTTTAACTTATAACTTTAATA
TATGCAAGAAAAGAGGTAAT

Downstream 100 bases:

>100_bases
GGAGTAACCAATGTATGGCAACAACGCTTATAGTCTTTATCAACAAAATTCAGTTTCAGTAGAATCCCCTGTAAAACTTG
TAGAAATGCTCTATGAAGGT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 682; Mature: 681

Protein sequence:

>682_residues
MALGTLSSLGLGSKVLNHDVIDKLREADEASLIKPIDKKIEQNVEKQTELVAITSTLRDLKSSTSKLGDYSTYLGRSSNV
IGDALKANISAGVPTQDIKIDIDSVATSDINEIGSKYESRESVFSQKDSVLKFHHKGHDYKIDIKAGMQLGEVAQLITDT
TKGEVMGIVMKTGGSNPYQLMINSKDTGESSRIYFGSTTSGSVVPSGAFSVNDGDLNITLKDKKGIDKTLSIKLPKTAIE
SKSQDNAEALKEAIITAIKNDSDFDGLLDNDINIGIGGANSDTLTLNDRRGYSIELQGSKAQSLGFGTENKNNAKEDLMV
ATKSVGAGKLTGTINIGSIPLDLSTLTKEKNTSAQNAKNIAEAINNIAGIYGSVNDEGKLVINSDTGEVNIYANDDPASK
KALEDLGLKAGTTMDYAKTQEELFKIRKVQKAEDAKFSYNGISMKRPTNNVDDIVSGVNIEFLTTTEPGKPAVISITRND
EEIIENVKKFVESYNDLALKLDDVTRYDEDSKIAGVFNGNSDIRMIRPSLNRIFSTTIQTETELKGLAKYGLTLNEKGTM
TLDVSKLQMALSSDPEGTQELFNGSLKTTEFKEVQTDGVFKKFDQEIDRLLNGPNARLKVLEESLTKDDKKLREDRKKAV
EQLNIRYDIMAQRFAAYDSQISKTNNAFSSVQLMIDQSVAKK

Sequences:

>Translated_682_residues
MALGTLSSLGLGSKVLNHDVIDKLREADEASLIKPIDKKIEQNVEKQTELVAITSTLRDLKSSTSKLGDYSTYLGRSSNV
IGDALKANISAGVPTQDIKIDIDSVATSDINEIGSKYESRESVFSQKDSVLKFHHKGHDYKIDIKAGMQLGEVAQLITDT
TKGEVMGIVMKTGGSNPYQLMINSKDTGESSRIYFGSTTSGSVVPSGAFSVNDGDLNITLKDKKGIDKTLSIKLPKTAIE
SKSQDNAEALKEAIITAIKNDSDFDGLLDNDINIGIGGANSDTLTLNDRRGYSIELQGSKAQSLGFGTENKNNAKEDLMV
ATKSVGAGKLTGTINIGSIPLDLSTLTKEKNTSAQNAKNIAEAINNIAGIYGSVNDEGKLVINSDTGEVNIYANDDPASK
KALEDLGLKAGTTMDYAKTQEELFKIRKVQKAEDAKFSYNGISMKRPTNNVDDIVSGVNIEFLTTTEPGKPAVISITRND
EEIIENVKKFVESYNDLALKLDDVTRYDEDSKIAGVFNGNSDIRMIRPSLNRIFSTTIQTETELKGLAKYGLTLNEKGTM
TLDVSKLQMALSSDPEGTQELFNGSLKTTEFKEVQTDGVFKKFDQEIDRLLNGPNARLKVLEESLTKDDKKLREDRKKAV
EQLNIRYDIMAQRFAAYDSQISKTNNAFSSVQLMIDQSVAKK
>Mature_681_residues
ALGTLSSLGLGSKVLNHDVIDKLREADEASLIKPIDKKIEQNVEKQTELVAITSTLRDLKSSTSKLGDYSTYLGRSSNVI
GDALKANISAGVPTQDIKIDIDSVATSDINEIGSKYESRESVFSQKDSVLKFHHKGHDYKIDIKAGMQLGEVAQLITDTT
KGEVMGIVMKTGGSNPYQLMINSKDTGESSRIYFGSTTSGSVVPSGAFSVNDGDLNITLKDKKGIDKTLSIKLPKTAIES
KSQDNAEALKEAIITAIKNDSDFDGLLDNDINIGIGGANSDTLTLNDRRGYSIELQGSKAQSLGFGTENKNNAKEDLMVA
TKSVGAGKLTGTINIGSIPLDLSTLTKEKNTSAQNAKNIAEAINNIAGIYGSVNDEGKLVINSDTGEVNIYANDDPASKK
ALEDLGLKAGTTMDYAKTQEELFKIRKVQKAEDAKFSYNGISMKRPTNNVDDIVSGVNIEFLTTTEPGKPAVISITRNDE
EIIENVKKFVESYNDLALKLDDVTRYDEDSKIAGVFNGNSDIRMIRPSLNRIFSTTIQTETELKGLAKYGLTLNEKGTMT
LDVSKLQMALSSDPEGTQELFNGSLKTTEFKEVQTDGVFKKFDQEIDRLLNGPNARLKVLEESLTKDDKKLREDRKKAVE
QLNIRYDIMAQRFAAYDSQISKTNNAFSSVQLMIDQSVAKK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 74316; Mature: 74185

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGTLSSLGLGSKVLNHDVIDKLREADEASLIKPIDKKIEQNVEKQTELVAITSTLRDL
CCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSSTSKLGDYSTYLGRSSNVIGDALKANISAGVPTQDIKIDIDSVATSDINEIGSKYESR
HHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ESVFSQKDSVLKFHHKGHDYKIDIKAGMQLGEVAQLITDTTKGEVMGIVMKTGGSNPYQL
HHHHHHCCHHEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
MINSKDTGESSRIYFGSTTSGSVVPSGAFSVNDGDLNITLKDKKGIDKTLSIKLPKTAIE
EEECCCCCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCHHHHC
SKSQDNAEALKEAIITAIKNDSDFDGLLDNDINIGIGGANSDTLTLNDRRGYSIELQGSK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCC
AQSLGFGTENKNNAKEDLMVATKSVGAGKLTGTINIGSIPLDLSTLTKEKNTSAQNAKNI
HHHCCCCCCCCCCCHHHHHEEECCCCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHH
AEAINNIAGIYGSVNDEGKLVINSDTGEVNIYANDDPASKKALEDLGLKAGTTMDYAKTQ
HHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHH
EELFKIRKVQKAEDAKFSYNGISMKRPTNNVDDIVSGVNIEFLTTTEPGKPAVISITRND
HHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHHHCCCCEEEEEECCCCCCEEEEEECCH
EEIIENVKKFVESYNDLALKLDDVTRYDEDSKIAGVFNGNSDIRMIRPSLNRIFSTTIQT
HHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHCC
ETELKGLAKYGLTLNEKGTMTLDVSKLQMALSSDPEGTQELFNGSLKTTEFKEVQTDGVF
HHHHHHHHHHCCEECCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHCHHH
KKFDQEIDRLLNGPNARLKVLEESLTKDDKKLREDRKKAVEQLNIRYDIMAQRFAAYDSQ
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ISKTNNAFSSVQLMIDQSVAKK
HHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALGTLSSLGLGSKVLNHDVIDKLREADEASLIKPIDKKIEQNVEKQTELVAITSTLRDL
CCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSSTSKLGDYSTYLGRSSNVIGDALKANISAGVPTQDIKIDIDSVATSDINEIGSKYESR
HHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ESVFSQKDSVLKFHHKGHDYKIDIKAGMQLGEVAQLITDTTKGEVMGIVMKTGGSNPYQL
HHHHHHCCHHEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
MINSKDTGESSRIYFGSTTSGSVVPSGAFSVNDGDLNITLKDKKGIDKTLSIKLPKTAIE
EEECCCCCCCCEEEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCHHHHC
SKSQDNAEALKEAIITAIKNDSDFDGLLDNDINIGIGGANSDTLTLNDRRGYSIELQGSK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCC
AQSLGFGTENKNNAKEDLMVATKSVGAGKLTGTINIGSIPLDLSTLTKEKNTSAQNAKNI
HHHCCCCCCCCCCCHHHHHEEECCCCCCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHH
AEAINNIAGIYGSVNDEGKLVINSDTGEVNIYANDDPASKKALEDLGLKAGTTMDYAKTQ
HHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHH
EELFKIRKVQKAEDAKFSYNGISMKRPTNNVDDIVSGVNIEFLTTTEPGKPAVISITRND
HHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHHHCCCCEEEEEECCCCCCEEEEEECCH
EEIIENVKKFVESYNDLALKLDDVTRYDEDSKIAGVFNGNSDIRMIRPSLNRIFSTTIQT
HHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHCC
ETELKGLAKYGLTLNEKGTMTLDVSKLQMALSSDPEGTQELFNGSLKTTEFKEVQTDGVF
HHHHHHHHHHCCEECCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHCHHH
KKFDQEIDRLLNGPNARLKVLEESLTKDDKKLREDRKKAVEQLNIRYDIMAQRFAAYDSQ
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ISKTNNAFSSVQLMIDQSVAKK
HHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]