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The map label for this gene is yibD [C]

Identifier: 32266272

GI number: 32266272

Start: 748506

End: 750071

Strand: Direct

Name: yibD [C]

Synonym: HH0773

Alternate gene names: 32266272

Gene position: 748506-750071 (Clockwise)

Preceding gene: 32266271

Following gene: 32266282

Centisome position: 41.6

GC content: 35.76

Gene sequence:

>1566_bases
ATGCAAAAACTTCCCATAAGCGTAACAATCTTAGTGAAAAATGCACAAGACACCATAAAAGAATGCTTAGAGTCTTTAAA
AAATTTTGATGAGATTATCTTGCTTGATAATGGTAGCACTGATAAAACTTTGGAAATAGCACGCAACTTCTCTAATGTGC
GGATTTTTGAGAGTGAATTTATCGGCTTTGGTGCTTTGAAAAACTTAGCGATAAGCTATGCGAAGCACGATTGGATTTTG
AGTATTGATTCTGATGAGGTGCTTGAGTTAAGCACACTTGCGCTTATAGAATCTTTAGAGCTCAATTCTCACACGATTTA
TGCCCTGCCACGTAAAAATCTCTATAATGGAGAGTGGATAAAGGCGTGTGGGTGGTATCCAGACTATGTTTGGCGACTTT
TTAATAAAACTTTCACGCGCTTTAATGACAATTTTGTTCACGAGAGTGTGATAATCCCCAAAAATGCGCACACACTCAAG
CTCTCAAGCGGAATAAAACATTACGCCTATGATAATATCGCTCATCTCCTTGAAAAACTCCAACGATACTCAAGCCTTTG
GGCAGAGCAAAACAAATATAAAAAATCAAGTCCATTTAAAGCAATCACACACGGACTTTGGACATTTTTTAGAGATTATT
TTTTCAAAAAAGGTATTTTTTATGGATACAAAGGTTTTGTGATTGCTACTTGCAATGGATTAGGCACTTTTTTTAAATAT
ATGAAGCTTTATGAGCTTCAAAACACGACCCCCCCCCGAGTATGTTCGCTTATCATCACTACTTATAATCAAAAAGAAAG
ACTGGCTTTAGTGCTAGATTCTGTAAAAAATCTTGCGCTTTTGCCAAGTGAAGTGCTTATTGCCGATGATGGCAGCACAG
AGGATACAAAAGAATTAATAGAATCTTATGCAAAAGACTTTCCTTGTCCTTTAAGGCATATTTGGCAGATGGATAAAGGC
TTTCGCTTAAGTGAGATTCGTAATCGTGCCATAAATGCGGCAAATGGAGAATATATTATTATCATTGATGGCGATATGAT
TTTAGATTCTCATTTTATAAAAGAGCATCTACACTTTGCAAAAAAAGGTGTATTTTTGCAAGGCTCTCGTGTGATTTTAA
ATGAAACCACTACGCAAAATATTATGCAATCTAACACAAAAGACGCCTTTAGCTTAGCCTTTAAACAAGGTGGATTCAAA
GCAAAACGATGTGTTTTACTCTCATCATTTATTTTTAATGCTTCTAAAATTACCTCATCATTTTTTGACAAAAAAGACTT
TATCAAAGGCATTCGCGGGTGCAATATGAGCTTTTTTAAGACTGATTGTATAAGTATTAATGGCTTTAATGAAGCATTTA
TTGGCTGGGGGAGGGAAGATTCTGAATTTGTGGCGAGATTTTTGTTTAATGGTGGAGAGATGAGGCGATTAAAATTTGCA
GGAATTGCCTATCATCTCTATCACCCTGAAAACTCCCGCACGATGTTAGAATCTAATCATAATATCTACTTACAAACTCT
AGCAAATAAAAGTCGCTATTGTGAGAGGGGCATAGAATCTAAATAA

Upstream 100 bases:

>100_bases
TTCAAACGCGAAATAACTTTGATTTCATACACGGGAATACAAGTTATCTTCATTTGGTATAATTTCAACAAACAATACTC
CCAAAATAAAAGAGTGAAAA

Downstream 100 bases:

>100_bases
CTCTATAATTTCTAGATTCTTTAAAAGCATTCAAACTACATTATTCTTTCTTTTGGCATAAGCCTTGCTGGATATAGCTT
TCTTGTGTTTTTAATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MQKLPISVTILVKNAQDTIKECLESLKNFDEIILLDNGSTDKTLEIARNFSNVRIFESEFIGFGALKNLAISYAKHDWIL
SIDSDEVLELSTLALIESLELNSHTIYALPRKNLYNGEWIKACGWYPDYVWRLFNKTFTRFNDNFVHESVIIPKNAHTLK
LSSGIKHYAYDNIAHLLEKLQRYSSLWAEQNKYKKSSPFKAITHGLWTFFRDYFFKKGIFYGYKGFVIATCNGLGTFFKY
MKLYELQNTTPPRVCSLIITTYNQKERLALVLDSVKNLALLPSEVLIADDGSTEDTKELIESYAKDFPCPLRHIWQMDKG
FRLSEIRNRAINAANGEYIIIIDGDMILDSHFIKEHLHFAKKGVFLQGSRVILNETTTQNIMQSNTKDAFSLAFKQGGFK
AKRCVLLSSFIFNASKITSSFFDKKDFIKGIRGCNMSFFKTDCISINGFNEAFIGWGREDSEFVARFLFNGGEMRRLKFA
GIAYHLYHPENSRTMLESNHNIYLQTLANKSRYCERGIESK

Sequences:

>Translated_521_residues
MQKLPISVTILVKNAQDTIKECLESLKNFDEIILLDNGSTDKTLEIARNFSNVRIFESEFIGFGALKNLAISYAKHDWIL
SIDSDEVLELSTLALIESLELNSHTIYALPRKNLYNGEWIKACGWYPDYVWRLFNKTFTRFNDNFVHESVIIPKNAHTLK
LSSGIKHYAYDNIAHLLEKLQRYSSLWAEQNKYKKSSPFKAITHGLWTFFRDYFFKKGIFYGYKGFVIATCNGLGTFFKY
MKLYELQNTTPPRVCSLIITTYNQKERLALVLDSVKNLALLPSEVLIADDGSTEDTKELIESYAKDFPCPLRHIWQMDKG
FRLSEIRNRAINAANGEYIIIIDGDMILDSHFIKEHLHFAKKGVFLQGSRVILNETTTQNIMQSNTKDAFSLAFKQGGFK
AKRCVLLSSFIFNASKITSSFFDKKDFIKGIRGCNMSFFKTDCISINGFNEAFIGWGREDSEFVARFLFNGGEMRRLKFA
GIAYHLYHPENSRTMLESNHNIYLQTLANKSRYCERGIESK
>Mature_521_residues
MQKLPISVTILVKNAQDTIKECLESLKNFDEIILLDNGSTDKTLEIARNFSNVRIFESEFIGFGALKNLAISYAKHDWIL
SIDSDEVLELSTLALIESLELNSHTIYALPRKNLYNGEWIKACGWYPDYVWRLFNKTFTRFNDNFVHESVIIPKNAHTLK
LSSGIKHYAYDNIAHLLEKLQRYSSLWAEQNKYKKSSPFKAITHGLWTFFRDYFFKKGIFYGYKGFVIATCNGLGTFFKY
MKLYELQNTTPPRVCSLIITTYNQKERLALVLDSVKNLALLPSEVLIADDGSTEDTKELIESYAKDFPCPLRHIWQMDKG
FRLSEIRNRAINAANGEYIIIIDGDMILDSHFIKEHLHFAKKGVFLQGSRVILNETTTQNIMQSNTKDAFSLAFKQGGFK
AKRCVLLSSFIFNASKITSSFFDKKDFIKGIRGCNMSFFKTDCISINGFNEAFIGWGREDSEFVARFLFNGGEMRRLKFA
GIAYHLYHPENSRTMLESNHNIYLQTLANKSRYCERGIESK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 60031; Mature: 60031

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLPISVTILVKNAQDTIKECLESLKNFDEIILLDNGSTDKTLEIARNFSNVRIFESEF
CCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCEEEEHHHH
IGFGALKNLAISYAKHDWILSIDSDEVLELSTLALIESLELNSHTIYALPRKNLYNGEWI
CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEE
KACGWYPDYVWRLFNKTFTRFNDNFVHESVIIPKNAHTLKLSSGIKHYAYDNIAHLLEKL
EECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH
QRYSSLWAEQNKYKKSSPFKAITHGLWTFFRDYFFKKGIFYGYKGFVIATCNGLGTFFKY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
MKLYELQNTTPPRVCSLIITTYNQKERLALVLDSVKNLALLPSEVLIADDGSTEDTKELI
HHHHHHCCCCCHHHHEEHHEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHH
ESYAKDFPCPLRHIWQMDKGFRLSEIRNRAINAANGEYIIIIDGDMILDSHFIKEHLHFA
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEEHHHHHHHHHHHHH
KKGVFLQGSRVILNETTTQNIMQSNTKDAFSLAFKQGGFKAKRCVLLSSFIFNASKITSS
HCCEEEECCEEEEECCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FFDKKDFIKGIRGCNMSFFKTDCISINGFNEAFIGWGREDSEFVARFLFNGGEMRRLKFA
HCCHHHHHHHHHCCCCEEEEECEEEECCCCHHHEECCCCHHHHHHHHHHCCCCEEEEEEE
GIAYHLYHPENSRTMLESNHNIYLQTLANKSRYCERGIESK
EEEEEEECCCCCCEEEECCCCEEEEEHHCHHHHHHCCCCCC
>Mature Secondary Structure
MQKLPISVTILVKNAQDTIKECLESLKNFDEIILLDNGSTDKTLEIARNFSNVRIFESEF
CCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCEEEEHHHH
IGFGALKNLAISYAKHDWILSIDSDEVLELSTLALIESLELNSHTIYALPRKNLYNGEWI
CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEE
KACGWYPDYVWRLFNKTFTRFNDNFVHESVIIPKNAHTLKLSSGIKHYAYDNIAHLLEKL
EECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH
QRYSSLWAEQNKYKKSSPFKAITHGLWTFFRDYFFKKGIFYGYKGFVIATCNGLGTFFKY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
MKLYELQNTTPPRVCSLIITTYNQKERLALVLDSVKNLALLPSEVLIADDGSTEDTKELI
HHHHHHCCCCCHHHHEEHHEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHH
ESYAKDFPCPLRHIWQMDKGFRLSEIRNRAINAANGEYIIIIDGDMILDSHFIKEHLHFA
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEEHHHHHHHHHHHHH
KKGVFLQGSRVILNETTTQNIMQSNTKDAFSLAFKQGGFKAKRCVLLSSFIFNASKITSS
HCCEEEECCEEEEECCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FFDKKDFIKGIRGCNMSFFKTDCISINGFNEAFIGWGREDSEFVARFLFNGGEMRRLKFA
HCCHHHHHHHHHCCCCEEEEECEEEECCCCHHHEECCCCHHHHHHHHHHCCCCEEEEEEE
GIAYHLYHPENSRTMLESNHNIYLQTLANKSRYCERGIESK
EEEEEEECCCCCCEEEECCCCEEEEEHHCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]